Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8l05
(578 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0459 - 25373687-25374721 31 0.88
10_08_0609 - 19196705-19196845,19196927-19196984,19197072-191971... 29 2.0
02_02_0509 - 11064209-11064470,11065945-11066132,11066249-110664... 29 2.0
04_04_0236 + 23825368-23825763,23826229-23828667 29 2.7
11_06_0676 + 26152192-26152367,26152669-26152708,26152857-261529... 29 3.5
11_04_0438 - 17737040-17737122,17737373-17737496,17737897-177381... 28 4.7
01_05_0654 + 23965868-23967718 28 4.7
05_03_0233 - 10704018-10704118,10704217-10705411 28 6.2
04_04_1512 - 34100660-34100768,34101732-34102268,34102376-341026... 28 6.2
03_01_0086 - 699617-699766,699851-699908,699998-700068,700210-70... 28 6.2
01_05_0436 + 22134275-22134387,22134481-22135249,22137024-221370... 28 6.2
04_03_0119 + 11485753-11486202 27 8.2
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 27 8.2
02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237 27 8.2
>04_04_0459 - 25373687-25374721
Length = 344
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 507 ADARCEWGAGVCRLQGHSEGSGEG 578
A+ RCEW R +GH++G G+G
Sbjct: 226 ANDRCEWFFAAVRPRGHAQGHGDG 249
>10_08_0609 -
19196705-19196845,19196927-19196984,19197072-19197142,
19197352-19197428,19197500-19197582,19197659-19197718,
19198007-19198142,19198247-19198317,19198560-19198651,
19198785-19198882,19199012-19199164,19199254-19199419,
19200112-19200510,19200592-19200673,19200739-19200962
Length = 636
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 463 WSRGSRVGKIWLINGLMLVANGGLVYAACRATLKALV 573
W RG +G L G ++ +GGL A A ALV
Sbjct: 269 WKRGGIIGAAALTGGTLMAISGGLAAPAIAAGFTALV 305
>02_02_0509 -
11064209-11064470,11065945-11066132,11066249-11066493,
11066816-11066987,11067090-11067496,11068443-11068587
Length = 472
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 387 ENQPA*EVDSQLVNIFEQHHDFLCGVVAKDHHTERDNQ 274
EN P+ + + H D L G VAK + T ++NQ
Sbjct: 78 ENMPSSSGSTNVATSISSHEDNLAGRVAKTNQTSKENQ 115
>04_04_0236 + 23825368-23825763,23826229-23828667
Length = 944
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 530 PPFATSISPLISQILPTLDPRDQKGHLSSKVTRRR 426
PPF ++ P+++ +P P G ++S TR+R
Sbjct: 903 PPFTPAVPPVVAPAVPPPAPAANVGDVASNSTRKR 937
>11_06_0676 +
26152192-26152367,26152669-26152708,26152857-26152966,
26153886-26153934,26154157-26154206,26154606-26155150,
26155583-26155743,26156231-26156440,26156525-26156690,
26156765-26156869,26157465-26157760
Length = 635
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 363 DSQLVNIFEQHHDFLCGVVAKDHHTERDNQLRDQQSAKN 247
+ +V F HD L G +DH+ +DN DQQ A N
Sbjct: 414 EQHVVLFFNCVHD-LVGAKFRDHYVAKDNFSSDQQDAVN 451
>11_04_0438 -
17737040-17737122,17737373-17737496,17737897-17738182,
17738265-17738397,17738742-17738953,17739455-17739816,
17739907-17739937,17744738-17745111
Length = 534
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 378 AGSPANVLHETTLHSRSASRNLTAEVSLLVSRVKSGQNLAYQWADARCEWGAGVCRLQGH 557
AG P + ++ + ++ SRNLT S +V V L+Y + + E VCR H
Sbjct: 124 AGMPIKIPGDSKIEIQNRSRNLTVYASKVVDSVAYNAMLSY--PEGQQEKCVAVCRRLEH 181
Query: 558 S 560
+
Sbjct: 182 A 182
>01_05_0654 + 23965868-23967718
Length = 616
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 577 PSPEPSEWPCKRHTPAPHSQRASA 506
P P P P RH P PH ASA
Sbjct: 3 PLPLPLPLPATRHPPKPHEASASA 26
>05_03_0233 - 10704018-10704118,10704217-10705411
Length = 431
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 487 CPLLTRETRRDTSAVRLRDADRLCSVVSCSTFAGEP 380
CP +R +S L D C ++SC FA EP
Sbjct: 208 CPQFSRGDMVFSSGGMLHWVDLNCGILSCDPFASEP 243
>04_04_1512 -
34100660-34100768,34101732-34102268,34102376-34102614,
34102929-34103111
Length = 355
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 342 FEQHHDFLCGVVAKDHHTERDNQLRDQQSAKNS 244
F+ DFL + + HH++ D+ +R QQ A N+
Sbjct: 307 FQDFLDFLPANMNRCHHSDNDSGMRRQQPAGNA 339
>03_01_0086 -
699617-699766,699851-699908,699998-700068,700210-700286,
700384-700466,700545-700604,700848-700983,701056-701126,
701248-701339,701454-701551,701891-702043,702146-702311,
702457-702885,703076-703157,703245-703504
Length = 661
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 463 WSRGSRVGKIWLINGLMLVANGGLVYAACRATLKAL 570
W RG +G L G +L GGL A A AL
Sbjct: 291 WKRGGIIGAAALTGGALLAITGGLAAPAIAAGFGAL 326
>01_05_0436 +
22134275-22134387,22134481-22135249,22137024-22137086,
22137375-22137755,22137900-22138001
Length = 475
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 567 SLQSGPASGIHQPPIRNEHQPIDKPNFA 484
S+ + A+GIHQPP + H P P FA
Sbjct: 10 SMPADIAAGIHQPPPPDLHDPSFWPAFA 37
>04_03_0119 + 11485753-11486202
Length = 149
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 456 SLLVSRVKSGQNLAYQWADARCEWGAGVCRLQGHSEGSGEG 578
+L V + G+++A +W A GA CR +G E G G
Sbjct: 11 ALAVGAAEDGEDVA-KWHGATSVTGARACRGRGDGEDGGSG 50
>03_01_0224 -
1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 381 GSPANVLHETTLHSRSASRNLTAEVSLLVSRVKS 482
G+PA + ET SRS NL + S L S VKS
Sbjct: 400 GAPAPFIPETLGPSRSKLENLMEQTSHLASLVKS 433
>02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237
Length = 572
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 460 FWSRGSRVGKIWLINGLMLVANGGLVYAACR 552
FWS +RV W+I+ LM A +VY R
Sbjct: 269 FWSSLARVSSSWVISPLMGAAVSFIVYKGIR 299
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,651,598
Number of Sequences: 37544
Number of extensions: 284052
Number of successful extensions: 911
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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