Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l05
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U41276-2|AAA82471.1|   82|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical protein
            F42E11.1 protein.
          Length = 1266

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 360  SQLVNIFEQHHDFLCGVVAKDHHTERD 280
            S  + + E+++D +CG V  D H  RD
Sbjct: 1069 STSIQLIERYYDAICGAVKIDDHDIRD 1095


>U41276-2|AAA82471.1|   82|Caenorhabditis elegans Hypothetical
           protein C52B11.4 protein.
          Length = 82

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +3

Query: 384 SPANVLHETTLHSRSASRNLTAEVSLLVSRVKSGQNLAYQWADAR 518
           +PA +LH  ++ S+S S +     S  V +  + +NL + W + R
Sbjct: 3   TPAQLLHTFSVSSKSLSADFGDVFSRQVDQKLNNRNLRFIWLNGR 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,303,748
Number of Sequences: 27780
Number of extensions: 235694
Number of successful extensions: 604
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)