Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l05
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   0.94 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.94 
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   3.8  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   3.8  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   3.8  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   3.8  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   6.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   6.7  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   6.7  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   8.8  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   8.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   8.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   8.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   8.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   8.8  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 492 LAYQWADARCEWGAGVCRLQGH 557
           L+  W     +WG G+C+L+ +
Sbjct: 91  LSVFWQQYPWQWGLGICKLRAY 112


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 339 EQHHDFLCGVVAKDHHTERDNQLRDQQ 259
           + HH  L     +DHH     Q + QQ
Sbjct: 145 QNHHHHLQSTAVQDHHRPYQQQQQQQQ 171


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPRDQKGH 453
           S PF   I P   +  P+L+PR +  H
Sbjct: 150 STPFPRFIPPNAYRFRPSLNPRFESTH 176


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPRDQKGH 453
           S PF   I P   +  P+L+PR +  H
Sbjct: 150 STPFPRFIPPNAYRFRPSLNPRFESTH 176


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPRDQKGH 453
           S PF   I P   +  P+L+PR +  H
Sbjct: 150 STPFPRFIPPNAYRFRPSLNPRFESTH 176


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPRDQKGH 453
           S PF   I P   +  P+L+PR +  H
Sbjct: 383 STPFPRFIPPNAYRFRPSLNPRFESTH 409


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPR 468
           S PF   ISP   +  P L+PR
Sbjct: 155 STPFPRFISPNAYRFRPPLNPR 176


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 273 LRDQQSAKNSSHXXXXXXXXXXLGHPRAS*VD 178
           LRD+  ++NS H          LGH  AS +D
Sbjct: 292 LRDENLSQNSYHEFQILPERGELGHCTASVMD 323


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 527 PFATSISPLISQILPTLDPRDQKGH 453
           PF   I P + +  P L+PR +  H
Sbjct: 375 PFPRFIPPNVYRFRPPLNPRFEPTH 399


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPRDQKGH 453
           S PF   I P   +  P L+PR +  H
Sbjct: 150 STPFPRFIPPNAYRFRPPLNPRFEPTH 176


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPRDQKGH 453
           S PF   I P   +  P L+PR +  H
Sbjct: 153 STPFPRFIPPNAYRFRPPLNPRFEPTH 179


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPRDQKGH 453
           S PF   I P   +  P L+PR +  H
Sbjct: 153 STPFPRFIPPNAYRFRPPLNPRFEPTH 179


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPRDQKGH 453
           S PF   I P   +  P L+PR +  H
Sbjct: 153 STPFPRFIPPNAYRFRPPLNPRFEPTH 179


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 533 SPPFATSISPLISQILPTLDPRDQKGH 453
           S PF   I P   +  P L+PR +  H
Sbjct: 153 STPFPRFIPPNAYRFRPPLNPRFEPTH 179


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 436 VTLLLRCPFWSRGSRVGKIWLI 501
           VTL  +CP+ S  S +G + L+
Sbjct: 629 VTLSTKCPYPSYYSYIGVLTLV 650


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,852
Number of Sequences: 438
Number of extensions: 3043
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)