Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l01
         (645 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2AFC3 Cluster: Putative uncharacterized protein precur...    33   7.8  
UniRef50_A4VWQ5 Cluster: Putative uncharacterized protein; n=3; ...    33   7.8  
UniRef50_Q6FSL0 Cluster: Similarities with sp|Q05854 Saccharomyc...    33   7.8  

>UniRef50_Q2AFC3 Cluster: Putative uncharacterized protein
           precursor; n=1; Halothermothrix orenii H 168|Rep:
           Putative uncharacterized protein precursor -
           Halothermothrix orenii H 168
          Length = 413

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 471 TRVVKDEESETKSNKSFSDKNEGKCVEYIEKSTSFTSRPILKRS 602
           T V   ++  TKSNK+  ++N      Y E  + FT  PILK S
Sbjct: 91  TNVNFPDKKNTKSNKNLIEENNDDIAVYPEYFSPFTGEPILKPS 134


>UniRef50_A4VWQ5 Cluster: Putative uncharacterized protein; n=3;
           Streptococcus suis|Rep: Putative uncharacterized protein
           - Streptococcus suis (strain 05ZYH33)
          Length = 250

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +2

Query: 92  KVMNFLITEFD*IIENVACSSSFKFNVPSNNAEGTWGN 205
           +V+  +IT F  II   AC + FK+N  S N  GTW N
Sbjct: 22  RVLRIIITLFTTIIVFFACLALFKYN--SGNISGTWRN 57


>UniRef50_Q6FSL0 Cluster: Similarities with sp|Q05854 Saccharomyces
           cerevisiae YLR278c; n=1; Candida glabrata|Rep:
           Similarities with sp|Q05854 Saccharomyces cerevisiae
           YLR278c - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 1423

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = +3

Query: 423 SCPTCTVIMSLFRHSQTRVVKDEESETKSNKSFSDKNEGKCVEYIEKSTSFTSRPILKRS 602
           SCP           S T+V K  ES+ K NK+ +++++ +   ++EK   +  + I  + 
Sbjct: 279 SCPESESSRINLPVSLTKVAKKNESKKKKNKNETNQDKDEYTLFLEKKLKYLEKIIDTQP 338

Query: 603 NSTLY 617
           NS  Y
Sbjct: 339 NSPAY 343


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,488,225
Number of Sequences: 1657284
Number of extensions: 8739731
Number of successful extensions: 24894
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24881
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)