Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k22
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   2.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   4.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.4  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -1

Query: 188 LYVPSIWKLTIFL*IVLINRKLFAK 114
           L + ++WKLTIFL  + ++ +L +K
Sbjct: 5   LSLVTLWKLTIFLSSMCLDPRLNSK 29


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 95  HSLRDIIF*NFPKY*KNRQGRRHS*R 18
           + + + I  NFP Y +N+QG ++S R
Sbjct: 107 NGIYEYIMRNFPYYRENKQGWQNSIR 132


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 435 TISVFSGYENLVLDFVII-FQVFIMGFFCS 349
           T+   SG+EN V  +++  F+ ++  FFCS
Sbjct: 27  TVVEESGFENFVKTYLVSDFENYVT-FFCS 55


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 384 IFQVFIMGFFC 352
           IF  F+MG FC
Sbjct: 75  IFGAFVMGLFC 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,949
Number of Sequences: 336
Number of extensions: 2716
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)