Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k22
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   1.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.2  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    22   4.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.9  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 251 YLMYVYNSICSSKECIFG*TFLYVPSIWKLTI 156
           Y + +YN+   S + +   TF+Y P   K TI
Sbjct: 208 YALIIYNNADDSFQRLTSSTFVYDPRYTKYTI 239


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 377 WNIMTKSNTRFSYPENTDIV 436
           W I+    TRF YP+   ++
Sbjct: 645 WMIIEPPGTRFFYPDRKQVI 664


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 377 WNIMTKSNTRFSYPENTDIV 436
           W I+    TRF YP+   ++
Sbjct: 735 WMIIEPPGTRFFYPDRKQVI 754


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +3

Query: 537 INKLKGTFSMEHFHNISHYQKICSYRNSV 623
           I+ L   +   +++N ++Y K   Y+N +
Sbjct: 82  ISSLSNNYKYSNYNNYNNYNKKLYYKNYI 110


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +1

Query: 262 QNIEKNDCFKFISCKSSIYSNFNI 333
           ++ +KN C  ++  KSS+  N+++
Sbjct: 567 EDADKNQCRHYLDAKSSV-QNYSL 589


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,112
Number of Sequences: 438
Number of extensions: 2865
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)