Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k21
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.5  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    24   1.5  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    24   1.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.8  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 521 KAQSLHQSP*VLFQWEFHFYQFFHPEKIFDHCL 423
           + +SL++S  +L +W+F  Y F   E+  D  L
Sbjct: 23  RGESLNKSLPILHEWKFFDYDFGSDERRQDAIL 55


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 69  NYESELFNSRNNFKYLK*LQIHLLIVKQFP 158
           NY S + N  NN  Y K L  ++  ++Q P
Sbjct: 88  NYISNISNYNNNNNYNKKLYYNINYIEQIP 117


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 69  NYESELFNSRNNFKYLK*LQIHLLIVKQFP 158
           NY S + N  NN  Y K L  ++  ++Q P
Sbjct: 326 NYISNISNYNNNNNYNKKLYYNINYIEQIP 355


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 521 KAQSLHQSP*VLFQWEFHFYQFFHPEKIFDHCL 423
           + +SL++S  +L +W+F  Y F   E+  D  L
Sbjct: 23  RGESLNKSLPILHEWKFFDYDFGSDERRQDAIL 55


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 521 KAQSLHQSP*VLFQWEFHFYQFFHPEKIFDHCL 423
           + +SL++S  +L +W+F  Y F   E+  D  L
Sbjct: 23  RGESLNKSLPILHEWKFFDYDFGSDERRQDAIL 55


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 441 LFRVEKLIKMKLPLKQHLGRLMKRLGFLL 527
           +F V  +  M++ LKQ + RL   LG+++
Sbjct: 212 VFAVNFMNVMRMKLKQFMPRLYDLLGYVM 240


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -3

Query: 631 DFWFKIEY--STNYWGDHYFVITPRY 560
           D+ + + Y   T+ WGD  FVI  ++
Sbjct: 56  DYNYTMNYLLDTDQWGDKTFVIIMKF 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,339
Number of Sequences: 438
Number of extensions: 3510
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)