BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8k20
(649 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 2.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 2.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 2.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 2.5
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.5
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 2.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.9
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 372 NLIRNNNNKAFYSDNGY 422
N I NNN K Y++N Y
Sbjct: 87 NTIHNNNYKYNYNNNNY 103
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 372 NLIRNNNNKAFYSDNGY 422
N I NNN K Y++N Y
Sbjct: 87 NTIHNNNYKYNYNNNNY 103
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 372 NLIRNNNNKAFYSDNGY 422
N I NNN K Y++N Y
Sbjct: 88 NTIHNNNYKYNYNNNNY 104
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 372 NLIRNNNNKAFYSDNGY 422
N I NNN K Y++N Y
Sbjct: 88 NTIHNNNYKYNYNNNNY 104
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 372 NLIRNNNNKAFYSDNGY 422
N I NNN K Y++N Y
Sbjct: 88 NTIHNNNYKYNYNNNNY 104
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 372 NLIRNNNNKAFYSDNGY 422
N I NNN K Y++N Y
Sbjct: 88 NTIHNNNYKYNYNNNNY 104
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R R+ +I + +NK +++N Y
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNY 96
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R R+ +I + +NK +++N Y
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNY 96
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R R+ +I + +NK +++N Y
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNY 96
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R R+ +I + +NK +++N Y
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNY 96
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R R+ +I + +NK +++N Y
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNY 96
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R R+ +I + +NK +++N Y
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNY 96
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R R+ +I + +NK +++N Y
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNY 96
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R R+ +I + +NK +++N Y
Sbjct: 306 RERSREPKIISSLSNKTIHNNNNY 329
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R R+ +I + +NK +++N Y
Sbjct: 306 RERSREPKIISSLSNKTIHNNNNY 329
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/24 (29%), Positives = 17/24 (70%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R +++ +I + +NK +++N Y
Sbjct: 306 RERSKESKIISSLSNKTIHNNNNY 329
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +3
Query: 351 RKRIRDTNLIRNNNNKAFYSDNGY 422
R+R ++ +I + +NK +++N Y
Sbjct: 295 RERSKEPKIISSLSNKTIHNNNNY 318
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,472
Number of Sequences: 438
Number of extensions: 3790
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -