Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k18
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061409-1|AAL28957.1|  198|Drosophila melanogaster LD33828p pro...   141   8e-34
AE014134-842|AAF52202.1|  198|Drosophila melanogaster CG3887-PA ...   141   8e-34
AE014298-754|AAF46045.1|  640|Drosophila melanogaster CG15780-PA...    29   5.4  

>AY061409-1|AAL28957.1|  198|Drosophila melanogaster LD33828p
           protein.
          Length = 198

 Score =  141 bits (341), Expect = 8e-34
 Identities = 63/134 (47%), Positives = 88/134 (65%), Gaps = 1/134 (0%)
 Frame = +3

Query: 246 NAMLLVCTLLFTLTHINADSD-EGSISKIGTSVGHTMNIYYCYSCGYKKVFEDYAGIIQQ 422
           N  LLV  L      + A+ + E  ++K G ++  TM   YCYSCGY+K FEDY G++ +
Sbjct: 8   NVALLVLCLCAGYALVFAEGEKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGE 67

Query: 423 KYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLEN 602
           KYP+I V G NYDPPG N YLS++I   K+++I+ ++S V+ F +L    P+WWS    N
Sbjct: 68  KYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQAN 127

Query: 603 KLYACMMMFFLANM 644
           K+YACMM+FFL NM
Sbjct: 128 KIYACMMIFFLGNM 141


>AE014134-842|AAF52202.1|  198|Drosophila melanogaster CG3887-PA
           protein.
          Length = 198

 Score =  141 bits (341), Expect = 8e-34
 Identities = 63/134 (47%), Positives = 88/134 (65%), Gaps = 1/134 (0%)
 Frame = +3

Query: 246 NAMLLVCTLLFTLTHINADSD-EGSISKIGTSVGHTMNIYYCYSCGYKKVFEDYAGIIQQ 422
           N  LLV  L      + A+ + E  ++K G ++  TM   YCYSCGY+K FEDY G++ +
Sbjct: 8   NVALLVLCLCAGYALVFAEGEKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGE 67

Query: 423 KYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLEN 602
           KYP+I V G NYDPPG N YLS++I   K+++I+ ++S V+ F +L    P+WWS    N
Sbjct: 68  KYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQAN 127

Query: 603 KLYACMMMFFLANM 644
           K+YACMM+FFL NM
Sbjct: 128 KIYACMMIFFLGNM 141


>AE014298-754|AAF46045.1|  640|Drosophila melanogaster CG15780-PA
           protein.
          Length = 640

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 21/77 (27%), Positives = 43/77 (55%)
 Frame = +1

Query: 286 LISMLIVMKAALVKLVQVSGIQ*ISITVILVATKRYLKTMQELYNKNTQRFLSLELTMTH 465
           L+ M++   A +++LV V G+Q   + ++LV  +  L+ ++ L  +   + L L L +  
Sbjct: 18  LVEMVLQFHALVLQLV-VIGMQLQVLVLVLVLEEIGLQVLKLLLEEMVLQLLLLVLQLME 76

Query: 466 LVLTCIYHELLVLAKCW 516
           +VL   + ++L+L K W
Sbjct: 77  MVL---HLQVLMLVKIW 90


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,828,195
Number of Sequences: 53049
Number of extensions: 621878
Number of successful extensions: 1511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)