Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k18
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical pr...    83   2e-16
Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical pr...    83   2e-16
Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical pr...    64   1e-10
AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical ...    30   1.2  
AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical p...    29   3.7  
Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    28   4.9  
AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical ...    28   4.9  

>Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical
           protein C35C5.3b protein.
          Length = 258

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 34/99 (34%), Positives = 58/99 (58%)
 Frame = +3

Query: 348 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 527
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 97  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 156

Query: 528 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANM 644
           +L G+N F       P        NK+ +CM++F L N+
Sbjct: 157 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNL 195


>Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical
           protein C35C5.3a protein.
          Length = 255

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 34/99 (34%), Positives = 58/99 (58%)
 Frame = +3

Query: 348 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 527
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 94  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 153

Query: 528 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANM 644
           +L G+N F       P        NK+ +CM++F L N+
Sbjct: 154 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNL 192


>Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical
           protein F28H7.4 protein.
          Length = 216

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
 Frame = +3

Query: 285 THINADSDEGSISKIGTSVG-HTMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYD 461
           T +N +S    +   G S     + I YC SCGYK+ F  +    ++KYP + + G N+ 
Sbjct: 49  TVVNENSHSQDVVDSGFSKDLPKLTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFS 108

Query: 462 PPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLAN 641
           P  +   L++I+G  K+ +I  +++G N F ++    P        N+    +++F + N
Sbjct: 109 PDFWKGCLAQIVGVAKIGLIAIVITGSNPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGN 168

Query: 642 M 644
           +
Sbjct: 169 L 169


>AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical
           protein Y50D4A.2 protein.
          Length = 192

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 452 SSNDRNLWVFLLYNSCIVFKYLFVATRITVIDIHCMPDT 336
           S N RNL +  +    + F  LF+   ++ I  +C+PDT
Sbjct: 99  SENSRNLKIDTVVKVFMQFSALFLLRHVSAITAYCIPDT 137


>AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical
           protein C36B7.6 protein.
          Length = 602

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 516 VIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANM 644
           V+  +L G  +++ +   Q  W+SW L N LY  ++MF    M
Sbjct: 452 VLFPLLVGYAVYSIIYVEQRGWYSWVL-NMLYGYLLMFGFITM 493


>Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical
           protein T08G3.8 protein.
          Length = 313

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 127 KNKYSVVKRNNHCESNDLHPFIY*IRLEKISVCQTICFT*TRCYSFVLY 273
           K  Y  + R N C S DLHP ++     +  + Q  CF    C  F+++
Sbjct: 34  KLSYYFLYRKNKCYSTDLHPVLF----RQFMIMQIACFF-NVCIKFLIF 77


>Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical
           protein Y57G11C.32 protein.
          Length = 795

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = +3

Query: 159 PLRKQRSSPIYLLNSVRKDISMSNNMFYLNAMLLVCTLLFTLTHINADSDE 311
           P    + +PI+  + ++ D+SM N++ +     L+ +  F  + +  +SDE
Sbjct: 158 PKTPSKFAPIFTESILQLDVSMQNDLLFFLEQHLISSAEFIFSELPLESDE 208


>Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical
           protein T13H5.8 protein.
          Length = 566

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +3

Query: 486 SRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLE---NKLYACMMMFFLANM 644
           S+ + +  +L++  ++ G  I++ L  P  +W SW LE   N +YA   +F L  +
Sbjct: 399 SQAMKYLSILLVPLVIGGA-IYSLLYVPHKSWRSWILETSANGVYAFGFLFMLPQL 453


>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 370 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 477
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 370 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 477
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical
           protein Y20F4.5 protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 370 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 477
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,409,832
Number of Sequences: 27780
Number of extensions: 342882
Number of successful extensions: 934
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)