Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k14
         (599 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0445 - 23679918-23680282,23680415-23683349                       32   0.31 
09_04_0142 + 15039745-15040538,15041094-15041218,15041842-150421...    29   2.8  
01_05_0067 - 17799260-17799615,17799736-17800134,17800400-17800412     29   3.8  
07_01_0004 + 35300-35533,35617-35732,39044-39287,39451-40578,406...    28   5.0  

>11_06_0445 - 23679918-23680282,23680415-23683349
          Length = 1099

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
 Frame = -3

Query: 561 VLYGAHHVEGSLRNVIQLAPKISKLFLPRTD------PDVSSYIRELLVLLARFHLFSKL 400
           ++   +H+ GS+ + I L P +S LF+P  +      P + S    + V L    L  ++
Sbjct: 173 IILSNNHIHGSIPSEIGLLPNLSALFIPNNELTGTIPPLLGSSKTLVWVNLQNNSLVGEI 232

Query: 399 RPVVFESTSTAHI*LTSTAL 340
            P +F S++  +I L+   L
Sbjct: 233 PPSLFNSSTITYIDLSQNGL 252


>09_04_0142 +
           15039745-15040538,15041094-15041218,15041842-15042137,
           15042267-15042554,15042834-15043193
          Length = 620

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 570 GDHVLYGAHHVEGSLRNVIQL 508
           G+HVL G  HV G  RN+I L
Sbjct: 524 GEHVLQGVRHVPGLKRNLISL 544


>01_05_0067 - 17799260-17799615,17799736-17800134,17800400-17800412
          Length = 255

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 570 GDHVLYGAHHVEGSLRNVIQL 508
           G+H+L G  HV G  RN+I L
Sbjct: 159 GEHILQGVRHVAGLKRNLISL 179


>07_01_0004 +
           35300-35533,35617-35732,39044-39287,39451-40578,
           40657-40833
          Length = 632

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 341 NAVEVSQICAVEVDSKTTGRSLLNR 415
           N  EVS++C  E+ +  TGRS L R
Sbjct: 149 NDHEVSEVCVEEISADNTGRSFLIR 173


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,655,499
Number of Sequences: 37544
Number of extensions: 190766
Number of successful extensions: 517
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)