Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k14
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05606-1|CAA29095.1|  312|Homo sapiens beta-subunit (AA 1-312) p...    43   0.001
X03559-1|CAA27246.1|  539|Homo sapiens protein ( Human mRNA for ...    43   0.001
M27132-1|AAA51809.1|  529|Homo sapiens ATP synthase beta subunit...    43   0.001
M19483-1|AAA51808.1|  529|Homo sapiens ATPSB protein.                  43   0.001
D00022-1|BAA00016.1|  539|Homo sapiens F1 beta subunit protein.        43   0.001
BC016512-1|AAH16512.1|  529|Homo sapiens ATP synthase, H+ transp...    43   0.001

>X05606-1|CAA29095.1|  312|Homo sapiens beta-subunit (AA 1-312)
           protein.
          Length = 312

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 508 ELDHIPEAAFYMVGTIEDVIAKSQELAK 591
           E DH+PE AFYMVG IE+ +AK+ +LA+
Sbjct: 281 EYDHLPEQAFYMVGPIEEAVAKADKLAE 308


>X03559-1|CAA27246.1|  539|Homo sapiens protein ( Human mRNA for
           F1-ATPase beta subunit (F-1 beta). ).
          Length = 539

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 508 ELDHIPEAAFYMVGTIEDVIAKSQELAK 591
           E DH+PE AFYMVG IE+ +AK+ +LA+
Sbjct: 508 EYDHLPEQAFYMVGPIEEAVAKADKLAE 535


>M27132-1|AAA51809.1|  529|Homo sapiens ATP synthase beta subunit
           precursor protein.
          Length = 529

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 508 ELDHIPEAAFYMVGTIEDVIAKSQELAK 591
           E DH+PE AFYMVG IE+ +AK+ +LA+
Sbjct: 498 EYDHLPEQAFYMVGPIEEAVAKADKLAE 525


>M19483-1|AAA51808.1|  529|Homo sapiens ATPSB protein.
          Length = 529

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 508 ELDHIPEAAFYMVGTIEDVIAKSQELAK 591
           E DH+PE AFYMVG IE+ +AK+ +LA+
Sbjct: 498 EYDHLPEQAFYMVGPIEEAVAKADKLAE 525


>D00022-1|BAA00016.1|  539|Homo sapiens F1 beta subunit protein.
          Length = 539

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 508 ELDHIPEAAFYMVGTIEDVIAKSQELAK 591
           E DH+PE AFYMVG IE+ +AK+ +LA+
Sbjct: 508 EYDHLPEQAFYMVGPIEEAVAKADKLAE 535


>BC016512-1|AAH16512.1|  529|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, beta polypeptide
           protein.
          Length = 529

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 508 ELDHIPEAAFYMVGTIEDVIAKSQELAK 591
           E DH+PE AFYMVG IE+ +AK+ +LA+
Sbjct: 498 EYDHLPEQAFYMVGPIEEAVAKADKLAE 525


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,661,995
Number of Sequences: 237096
Number of extensions: 1039189
Number of successful extensions: 3409
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3399
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)