Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k14
         (599 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    21   7.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.0  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   7.0  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.2  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 250 PSPDYELETTAGLYTATGPSTDLSKTK 330
           P P +EL      +T T  S D + TK
Sbjct: 33  PRPSFELSKNGDEWTFTSSSGDNTYTK 59


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/30 (30%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +2

Query: 329 NENIN--AVEVSQICAVEVDSKTTGRSLLN 412
           N+ +N  A+ +    ++ VDS T+G +++N
Sbjct: 542 NQTVNPVAINIPGDTSIIVDSSTSGATIVN 571


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 250 PSPDYELETTAGLYTATGPSTDLSKTK 330
           P P +EL      +T T  S D + TK
Sbjct: 35  PRPSFELSKNGDEWTFTSSSGDNTYTK 61


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 473 LILMFLLIFESCWYFSRG 420
           ++L+F L+  SC   SRG
Sbjct: 5   ILLLFFLLLSSCTRPSRG 22


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 473 LILMFLLIFESCWYFSRG 420
           ++L+F L+  SC   SRG
Sbjct: 5   ILLLFFLLLSSCTRPSRG 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,890
Number of Sequences: 438
Number of extensions: 2198
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)