Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k13
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.1  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.3  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 287 CETGVYPEE*SGKNNTKCRLRAQPLEQHHHNN 382
           C+ G+YPE  +  N T  +L    L++ + ++
Sbjct: 92  CQQGIYPENKTLINETSLQLDENKLDKKNDDS 123


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 159 HQLRSRSINRPSPATLHSPIP 221
           HQ  ++S  RP+PA+ ++P P
Sbjct: 250 HQPATKSKPRPAPASRNAPEP 270


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 287 CETGVYPEE*SGKNNTKCRLRAQPLEQHHHNN 382
           C+ G+YPE  +  N T  +L    L++ + ++
Sbjct: 92  CQQGIYPENKTLINETSLQLDENKLDKKNDDS 123


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 287 CETGVYPEE*SGKNNTKCRLRAQPLEQ 367
           C+ G+YPE  +  N T  +L    L++
Sbjct: 92  CQQGIYPENKTLINETSLQLDENKLDK 118


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 52  NEPCSNATTRDYIEMTS 2
           + PCSNA T D +++ +
Sbjct: 304 SNPCSNAGTLDCVQLVN 320


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -1

Query: 360 NGWARSRHLVLFLPLYSSG*TPVSHLC 280
           N W +  +L+    LY++    + H+C
Sbjct: 903 NDWLQLGYLIFVSTLYTANVVCICHVC 929


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 26  SSRVATGLIVVRHESPFQCRFKC-SRFR 106
           S+++   +++  +E PF+C  KC  RFR
Sbjct: 231 SNQLKAHVLIHTNEKPFECD-KCRGRFR 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,870
Number of Sequences: 336
Number of extensions: 2475
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)