BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8k12
(357 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146748-1|AAO12063.1| 279|Anopheles gambiae odorant-binding pr... 29 0.069
AY659929-1|AAT51797.1| 140|Anopheles gambiae lysozyme c-2 protein. 23 3.4
>AY146748-1|AAO12063.1| 279|Anopheles gambiae odorant-binding
protein AgamOBP41 protein.
Length = 279
Score = 28.7 bits (61), Expect = 0.069
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 182 CLGFA*LLLVLCWIYNSVLERQRSIFVILHSLDCRHVGTR 63
C G A LC+ YN RQ S+FV L L +HV +R
Sbjct: 128 CCGLA-FESFLCYYYNYGNLRQDSVFVPLDHLQLQHVTSR 166
>AY659929-1|AAT51797.1| 140|Anopheles gambiae lysozyme c-2 protein.
Length = 140
Score = 23.0 bits (47), Expect = 3.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 224 EDVSSNDACAQMQYCDYGYKEDY 292
+D+S + CA+M Y +G+ Y
Sbjct: 100 DDISEDIKCAKMVYSHHGFNAWY 122
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 291,558
Number of Sequences: 2352
Number of extensions: 4617
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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