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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k12
         (357 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y16106-1|CAA76073.1|  734|Homo sapiens cGMP-dependant protein ki...    29   5.6  
X94612-1|CAA64318.1|  762|Homo sapiens Type II cGMP-dependent pr...    29   5.6  
D70899-1|BAA18934.1|  762|Homo sapiens cGMP-dependent protein ki...    29   5.6  
Y14372-2|CAB51806.1|  674|Homo sapiens gamma adducin protein.          28   9.8  
Y14372-1|CAB51805.1|  706|Homo sapiens gamma adducin protein.          28   9.8  
D67031-1|BAA23783.1|  674|Homo sapiens adducin-like protein prot...    28   9.8  
BC062559-1|AAH62559.1|  706|Homo sapiens adducin 3 (gamma) protein.    28   9.8  
AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ...    28   9.8  
AL590628-2|CAH71740.1|  706|Homo sapiens adducin 3 (gamma) protein.    28   9.8  
AL590628-1|CAH71739.1|  674|Homo sapiens adducin 3 (gamma) protein.    28   9.8  
AK223270-1|BAD96990.1|  667|Homo sapiens adducin 3 isoform a var...    28   9.8  
AB209810-1|BAD93047.1|  698|Homo sapiens adducin 3 isoform a var...    28   9.8  

>Y16106-1|CAA76073.1|  734|Homo sapiens cGMP-dependant protein
           kinase protein.
          Length = 734

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 138 QLGSGAPTFHLCDTAQFRLPPCWNAKGQATAANFWS 31
           ++GSG  T+  C T ++  P     KG   + +FWS
Sbjct: 600 KIGSGQKTWTFCGTPEYVAPEVILNKGHDFSVDFWS 635


>X94612-1|CAA64318.1|  762|Homo sapiens Type II cGMP-dependent
           protein kinase protein.
          Length = 762

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 138 QLGSGAPTFHLCDTAQFRLPPCWNAKGQATAANFWS 31
           ++GSG  T+  C T ++  P     KG   + +FWS
Sbjct: 600 KIGSGQKTWTFCGTPEYVAPEVILNKGHDFSVDFWS 635


>D70899-1|BAA18934.1|  762|Homo sapiens cGMP-dependent protein
           kinase II protein.
          Length = 762

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 138 QLGSGAPTFHLCDTAQFRLPPCWNAKGQATAANFWS 31
           ++GSG  T+  C T ++  P     KG   + +FWS
Sbjct: 600 KIGSGQKTWTFCGTPEYVAPEVILNKGHDFSVDFWS 635


>Y14372-2|CAB51806.1|  674|Homo sapiens gamma adducin protein.
          Length = 674

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 35  QKFAAVAWPFAFQHGGSLNCAVSQRWNVGAPE 130
           QK+ A  +  A   GG +N    Q+W VG  E
Sbjct: 339 QKYKAFTYTVAASGGGGVNMGSHQKWKVGEIE 370


>Y14372-1|CAB51805.1|  706|Homo sapiens gamma adducin protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 35  QKFAAVAWPFAFQHGGSLNCAVSQRWNVGAPE 130
           QK+ A  +  A   GG +N    Q+W VG  E
Sbjct: 339 QKYKAFTYTVAASGGGGVNMGSHQKWKVGEIE 370


>D67031-1|BAA23783.1|  674|Homo sapiens adducin-like protein
           protein.
          Length = 674

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 35  QKFAAVAWPFAFQHGGSLNCAVSQRWNVGAPE 130
           QK+ A  +  A   GG +N    Q+W VG  E
Sbjct: 339 QKYKAFTYTVAASGGGGVNMGSHQKWKVGEIE 370


>BC062559-1|AAH62559.1|  706|Homo sapiens adducin 3 (gamma) protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 35  QKFAAVAWPFAFQHGGSLNCAVSQRWNVGAPE 130
           QK+ A  +  A   GG +N    Q+W VG  E
Sbjct: 339 QKYKAFTYTVAASGGGGVNMGSHQKWKVGEIE 370


>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
            domains protein 1 short form protein.
          Length = 3389

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 86   LNCAVSQRWNVGAPEPSCRS 145
            L C  +  WN+G   PSCR+
Sbjct: 2602 LRCQANGTWNIGDERPSCRA 2621


>AL590628-2|CAH71740.1|  706|Homo sapiens adducin 3 (gamma) protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 35  QKFAAVAWPFAFQHGGSLNCAVSQRWNVGAPE 130
           QK+ A  +  A   GG +N    Q+W VG  E
Sbjct: 339 QKYKAFTYTVAASGGGGVNMGSHQKWKVGEIE 370


>AL590628-1|CAH71739.1|  674|Homo sapiens adducin 3 (gamma) protein.
          Length = 674

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 35  QKFAAVAWPFAFQHGGSLNCAVSQRWNVGAPE 130
           QK+ A  +  A   GG +N    Q+W VG  E
Sbjct: 339 QKYKAFTYTVAASGGGGVNMGSHQKWKVGEIE 370


>AK223270-1|BAD96990.1|  667|Homo sapiens adducin 3 isoform a
           variant protein.
          Length = 667

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 35  QKFAAVAWPFAFQHGGSLNCAVSQRWNVGAPE 130
           QK+ A  +  A   GG +N    Q+W VG  E
Sbjct: 300 QKYKAFTYTVAASGGGGVNMGSHQKWKVGEIE 331


>AB209810-1|BAD93047.1|  698|Homo sapiens adducin 3 isoform a
           variant protein.
          Length = 698

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 35  QKFAAVAWPFAFQHGGSLNCAVSQRWNVGAPE 130
           QK+ A  +  A   GG +N    Q+W VG  E
Sbjct: 340 QKYKAFTYTVAASGGGGVNMGSHQKWKVGEIE 371


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,062,445
Number of Sequences: 237096
Number of extensions: 629079
Number of successful extensions: 1307
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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