Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k06
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.8  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 489 KTQPRQYS*IKGSHTRER 542
           K+ PRQYS  +G H + R
Sbjct: 197 KSLPRQYSQSRGRHNQSR 214


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/52 (23%), Positives = 19/52 (36%)
 Frame = -1

Query: 629 STGSGNARSASRISWYRFPRIYSNTKYRVSFSRMTSLNLTILAWLSFLSDFT 474
           S G+   R+ + +SW     I S +   V        N T   W++     T
Sbjct: 165 SPGAAAGRTGNSLSWNNPCSINSTSSQPVGTQIHQQTNHTFYPWMAIADSMT 216


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 343 LQQLGDGTYGSVVLAQ 390
           LQ++ DG YGSVV+ Q
Sbjct: 249 LQKM-DGLYGSVVIRQ 263


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 343 LQQLGDGTYGSVVLAQ 390
           LQ++ DG YGSVV+ Q
Sbjct: 249 LQKM-DGLYGSVVIRQ 263


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 624 RFWECTIGIP 595
           RFWEC   IP
Sbjct: 25  RFWECLAPIP 34


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 624 RFWECTIGIP 595
           RFWEC   IP
Sbjct: 25  RFWECLAPIP 34


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 660 PLQNLVYDVSQHRFWECTIGIP 595
           P  N+    S +R+W+C  G P
Sbjct: 160 PNGNVPLGKSCNRYWQCQGGYP 181


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 186 LSVSFDK*CYEFMLEKKLFGDSKGLSFITGITFKILL 76
           L+   +K CY+  +    F D  G SF+    +  LL
Sbjct: 256 LTTVVEKECYKMKVTIDAFNDIFGWSFLLFTLYSSLL 292


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 186 LSVSFDK*CYEFMLEKKLFGDSKGLSFITGITFKILL 76
           L+   +K CY+  +    F D  G SF+    +  LL
Sbjct: 182 LTTVVEKECYKMKVTIDAFNDIFGWSFLLFTLYSSLL 218


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +3

Query: 576 KSVPADTGCRSCIPRTGAEKHHIP 647
           + +P D   R   PR G+   H P
Sbjct: 189 RPLPLDQKARDLSPRNGSPTDHSP 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,961
Number of Sequences: 336
Number of extensions: 3529
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)