Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k05
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.6  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 190 ADDPKFVLLLHHFVFPVSIGL 128
           AD+P + L   HF+F + IG+
Sbjct: 661 ADNPGYWLFHCHFLFHIVIGM 681


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 190 ADDPKFVLLLHHFVFPVSIGL 128
           A++P F L   HF+F + IG+
Sbjct: 661 ANNPGFWLFHCHFLFHIVIGM 681


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 175 FVLLLHHFVFPVSIGLPICRLDIRVRFQ 92
           +V+LLH   + +S+G+ +   D+   F+
Sbjct: 178 YVVLLHFLTYNLSLGIKLRYDDVNNLFR 205


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 175 FVLLLHHFVFPVSIGLPICRLDIRVRFQ 92
           +V+LLH   + +S+G+ +   D+   F+
Sbjct: 178 YVVLLHFLTYNLSLGIKLRYDDVNNLFR 205


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 201 VLEPQMIQNLFYCCTISFFL*VLDYQSAVWI 109
           V+E  + Q+ F C  +S      DY +  W+
Sbjct: 73  VVEKILTQSSFECIHLSVLHKCYDYDAIPWL 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,548
Number of Sequences: 336
Number of extensions: 2199
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)