BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8k04
(656 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein. 25 1.6
U21917-1|AAA73920.1| 271|Anopheles gambiae serine protease prot... 23 8.5
AY604022-1|AAT38516.1| 172|Anopheles gambiae LZ3788P protein. 23 8.5
AY330175-1|AAQ16281.1| 200|Anopheles gambiae odorant-binding pr... 23 8.5
AJ618919-1|CAF01998.1| 200|Anopheles gambiae putative odorant-b... 23 8.5
>DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein.
Length = 494
Score = 25.4 bits (53), Expect = 1.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 364 TKSSFGKDMRRSAISSKINHQRYGS 438
T FGK + S+++ K HQRYG+
Sbjct: 133 THEEFGKVLTPSSMNWKRMHQRYGN 157
>U21917-1|AAA73920.1| 271|Anopheles gambiae serine protease
protein.
Length = 271
Score = 23.0 bits (47), Expect = 8.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 394 RSAISSKINHQRYGSR*ND 450
R A++ I H+RYG+ ND
Sbjct: 118 RRAVARVITHERYGNFKND 136
>AY604022-1|AAT38516.1| 172|Anopheles gambiae LZ3788P protein.
Length = 172
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 233 CSAGTSDTTEESEVCEIPEQVEFTVVFNKVK 325
C+AG T +E C P V+ T++ + K
Sbjct: 5 CAAGPPVDTNPAECCPTPMLVDGTIMMDCYK 35
>AY330175-1|AAQ16281.1| 200|Anopheles gambiae odorant-binding
protein AgamOBP48 protein.
Length = 200
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 233 CSAGTSDTTEESEVCEIPEQVEFTVVFNKVK 325
C+AG T +E C P V+ T++ + K
Sbjct: 33 CAAGPPVDTNPAECCPTPMLVDGTIMMDCYK 63
>AJ618919-1|CAF01998.1| 200|Anopheles gambiae putative
odorant-binding protein OBP3788 protein.
Length = 200
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 233 CSAGTSDTTEESEVCEIPEQVEFTVVFNKVK 325
C+AG T +E C P V+ T++ + K
Sbjct: 33 CAAGPPVDTNPAECCPTPMLVDGTIMMDCYK 63
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,020
Number of Sequences: 2352
Number of extensions: 11902
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -