Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8k04
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin ...    31   0.72 
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   2.2  
AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin
           protein 6 protein.
          Length = 407

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 242 GTSDTTEESEVCEIPEQVEFTVVFNKVKHDITFAYDATVLELKAHLERICG 394
           G  DT   + VCE+ E +E +  +N   H  +F   AT  + +   E+ CG
Sbjct: 138 GDCDTETRAFVCELTETLEDSCEYNYNGHCYSFHQPATFAQAQVICEQECG 188


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -3

Query: 309  TTVNSTCSGISQTSLSSVVSDVPAEHSAGGSICN--IFSLTTGLSMILVAPFDT 154
            TTV S+  G +QTS+SS  S VP   S G ++ N    S T+G S     P  T
Sbjct: 1530 TTVGSSTVGATQTSVSS--STVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSST 1581


>AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical
           protein Y92H12BL.5 protein.
          Length = 150

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +2

Query: 368 KAHLERICGVPQSAQKLIIKGMARDEMTLRKAGIVKGGKVMLVGSKMD-DILAVKSVPKE 544
           K  L    G    A  L IKG  ++ + L  +G   GGK ++ G  ++ D  A ++  +E
Sbjct: 14  KVRLRDTDGFRIRAAALCIKGTGKETLVLLVSGGKDGGKWVVPGGGIEKDECAEEAAHRE 73

Query: 545 ILEEKATTQT 574
           ++EE     T
Sbjct: 74  LMEEAGVRAT 83


>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +2

Query: 512 DILAVKSVPKEILEEKATTQTSKEPLCMQKI 604
           +++AVK + K  ++E +T+Q  KE  CM+ +
Sbjct: 51  EMVAVKIIDKTKMDEASTSQIMKEVRCMKLV 81


>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +2

Query: 512 DILAVKSVPKEILEEKATTQTSKEPLCMQKI 604
           +++AVK + K  ++E +T+Q  KE  CM+ +
Sbjct: 51  EMVAVKIIDKTKMDEASTSQIMKEVRCMKLV 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,169,004
Number of Sequences: 27780
Number of extensions: 274955
Number of successful extensions: 855
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)