Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8j23
(621 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 24 1.4
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 2.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.4
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 22 4.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.2
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 4.2
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 7.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 9.7
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 9.7
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 9.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.7
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 9.7
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 9.7
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 9.7
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 42 EPKCLYFLSFTCYEIQFMFKYNNSYYNWTPFMYCDLQF 155
EPK + LS Y YNN+Y N+ +Y ++ +
Sbjct: 78 EPKIISSLSNN-YNYSNYNNYNNNYNNYNKKLYYNINY 114
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 415 FLGYSTNGFSPIEFLLF 365
+LGYS + F+PI + +F
Sbjct: 312 WLGYSNSAFNPIIYSIF 328
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 66 SFTCYEIQFMFKYNNSYY 119
+FTC E+ F+ K YY
Sbjct: 230 NFTCLEVVFVLKRRLGYY 247
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 43 NRNACIFFHLLAMKYSSCLNTITV 114
N + ++FH LA + S +NT +
Sbjct: 258 NNDRILYFHSLASRVESWVNTSVI 281
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 99 KYNNSYYNWTPFMYCDLQF 155
K N YYN P Y D+ F
Sbjct: 205 KRNEIYYNCCPEPYIDITF 223
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 22.2 bits (45), Expect = 4.2
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Frame = +1
Query: 34 NGTNRNACIFFHLLAMKYSSCLNT------ITVIIIGLHLCTVIFNFERIKSSNLKNSQR 195
N NR + L+MK +N + I+G ++ +I N S N N+Q
Sbjct: 535 NRMNRQMNEYMMALSMKLQKFINNDYNFNEVNFRILGANVNDLIMNTRCANSDNQNNNQN 594
Query: 196 KN 201
K+
Sbjct: 595 KH 596
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 118 IIGLHLCTVIFNFERIKSSNLKNSQRK 198
I+G ++ +I N KS+N N+Q K
Sbjct: 403 ILGANVNNLIKNTRCAKSNNQNNNQNK 429
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 9.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 69 FTCYEIQFMFKYNNSYY 119
++C ++ +FK SYY
Sbjct: 228 YSCLKVDLLFKREFSYY 244
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 9.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 69 FTCYEIQFMFKYNNSYY 119
++C ++ +FK SYY
Sbjct: 228 YSCLKVDLLFKREFSYY 244
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 536 TKILRNVSEILTDAVIWAS 592
T ILR + E+ DA W S
Sbjct: 324 TSILRYLQELHVDAPTWIS 342
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 550 PQYLCSLLPNLLKSHHEFLKQ*YHN 476
P+ + SLL N + +++ + K Y+N
Sbjct: 301 PKIISSLLNNTIHNNNNYKKLQYYN 325
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 550 PQYLCSLLPNLLKSHHEFLKQ*YHN 476
P+ + SLL N + +++ + K Y+N
Sbjct: 312 PKIISSLLNNTIHNNNNYKKLQYYN 336
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 550 PQYLCSLLPNLLKSHHEFLKQ*YHN 476
P+ + SLL N + +++ + K Y+N
Sbjct: 312 PKIISSLLNNTIHNNNNYKKLQYYN 336
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 550 PQYLCSLLPNLLKSHHEFLKQ*YHN 476
P+ + SLL N + +++ + K Y+N
Sbjct: 301 PKIISSLLNNTIHNNNNYKKLQYYN 325
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,998
Number of Sequences: 438
Number of extensions: 3348
Number of successful extensions: 26
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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