Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8j22
         (588 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB019510-1|BAA34362.1|  709|Drosophila melanogaster DREF transcr...    31   0.88 
BT004872-1|AAO45228.1|  709|Drosophila melanogaster LD24482p pro...    31   1.5  
AE014134-1744|AAF52841.1|  709|Drosophila melanogaster CG5838-PA...    31   1.5  
AB010823-1|BAA24827.1|  709|Drosophila melanogaster DREF protein.      31   1.5  
AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p pro...    29   6.2  
AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA...    29   6.2  

>AB019510-1|BAA34362.1|  709|Drosophila melanogaster DREF
           transcription factor protein.
          Length = 709

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +2

Query: 158 PQQTQAMG-IYVRNLLNLRGSSVFNSNLKKLTRRYSNFPFLDLHQQITGQNLSSTCLEKI 334
           P    A+G I   ++  L  S +++  +K +  RY  FP  D ++ IT QN+      K+
Sbjct: 6   PASPVAIGEIKYEDVSQLNFSKLYSPKMKSVYWRYFGFPSNDNNEVITKQNVVCIKCHKV 65

Query: 335 KRQHPNIDKL 364
              H N   L
Sbjct: 66  LTNHGNTTNL 75


>BT004872-1|AAO45228.1|  709|Drosophila melanogaster LD24482p
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +2

Query: 158 PQQTQAMG-IYVRNLLNLRGSSVFNSNLKKLTRRYSNFPFLDLHQQITGQNLSSTCLEKI 334
           P    A+G +   ++  L  S +++  +K +  RY  FP  D ++ IT QN+      K+
Sbjct: 6   PASPVAIGELKYEDVSQLNFSKLYSPKMKSVYWRYFGFPSNDNNEVITKQNVVCIKCHKV 65

Query: 335 KRQHPNIDKL 364
              H N   L
Sbjct: 66  LTNHGNTTNL 75


>AE014134-1744|AAF52841.1|  709|Drosophila melanogaster CG5838-PA
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +2

Query: 158 PQQTQAMG-IYVRNLLNLRGSSVFNSNLKKLTRRYSNFPFLDLHQQITGQNLSSTCLEKI 334
           P    A+G +   ++  L  S +++  +K +  RY  FP  D ++ IT QN+      K+
Sbjct: 6   PASPVAIGELKYEDVSQLNFSKLYSPKMKSVYWRYFGFPSNDNNEVITKQNVVCIKCHKV 65

Query: 335 KRQHPNIDKL 364
              H N   L
Sbjct: 66  LTNHGNTTNL 75


>AB010823-1|BAA24827.1|  709|Drosophila melanogaster DREF protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +2

Query: 158 PQQTQAMG-IYVRNLLNLRGSSVFNSNLKKLTRRYSNFPFLDLHQQITGQNLSSTCLEKI 334
           P    A+G +   ++  L  S +++  +K +  RY  FP  D ++ IT QN+      K+
Sbjct: 6   PASPVAIGELKYEDVSQLNFSKLYSPKMKSVYWRYFGFPSNDNNEVITKQNVVCIKCHKV 65

Query: 335 KRQHPNIDKL 364
              H N   L
Sbjct: 66  LTNHGNTTNL 75


>AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p
           protein.
          Length = 866

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 42  CLLIKMNYYKQEKIQKLLHQYVLPICHTYH*FNELKKSVHSKHRPWGF 185
           CL++K  YY+   +    H  VL +  T    NE    ++ +H  W F
Sbjct: 116 CLILKERYYQLPSMPTRGHGLVLLLFWTLAFINESLAFINLRHEDWWF 163


>AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA
           protein.
          Length = 866

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 42  CLLIKMNYYKQEKIQKLLHQYVLPICHTYH*FNELKKSVHSKHRPWGF 185
           CL++K  YY+   +    H  VL +  T    NE    ++ +H  W F
Sbjct: 116 CLILKERYYQLPSMPTRGHGLVLLLFWTLAFINESLAFINLRHEDWWF 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,742,878
Number of Sequences: 53049
Number of extensions: 468660
Number of successful extensions: 1098
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)