Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8j22
         (588 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.8  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   9.0  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   9.0  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   9.0  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   9.0  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   9.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 20  ETLT*NVMFTNKNELL*TRKNTEVIT 97
           ET+  N  F  +NEL+   K  ++IT
Sbjct: 478 ETILQNACFCARNELMMILKEIKIIT 503


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 550 KSVIFDNVFGYNFDELTFS*NFSI 479
           K  + D VFG+  D   ++ NF+I
Sbjct: 642 KMTLDDKVFGFPLDRPMWAWNFTI 665


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 550 KSVIFDNVFGYNFDELTFS*NFSI 479
           K  + D VFG+  D   ++ NF+I
Sbjct: 642 KMTLDDKVFGFPLDRPMWAWNFTI 665


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 517 YNQTHYQISHSCKIQDNRQIKK 582
           +  +HY    SC    NR+ +K
Sbjct: 226 HTSSHYSRERSCSRDRNREYRK 247


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 517 YNQTHYQISHSCKIQDNRQIKK 582
           +  +HY    SC    NR+ +K
Sbjct: 226 HTSSHYSRERSCSRDRNREYRK 247


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 517 YNQTHYQISHSCKIQDNRQIKK 582
           +  +HY    SC    NR+ +K
Sbjct: 226 HTSSHYSRERSCSRDRNREYRK 247


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 517 YNQTHYQISHSCKIQDNRQIKK 582
           +  +HY    SC    NR+ +K
Sbjct: 226 HTSSHYSRERSCSRDRNREYRK 247


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 517 YNQTHYQISHSCKIQDNRQIKK 582
           +  +HY    SC    NR+ +K
Sbjct: 215 HTSSHYSRERSCSRDRNREYRK 236


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +2

Query: 143 IKKICPQQTQAMGIYVRNLL 202
           +KK+CPQ+     + + ++L
Sbjct: 262 LKKLCPQEEACFRLLMNDIL 281


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +2

Query: 143 IKKICPQQTQAMGIYVRNLL 202
           +KK+CPQ+     + + ++L
Sbjct: 177 LKKLCPQEEACFRLLMNDIL 196


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +2

Query: 143 IKKICPQQTQAMGIYVRNLL 202
           +KK+CPQ+     + + ++L
Sbjct: 496 LKKLCPQEEACFRLLMNDIL 515


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,187
Number of Sequences: 438
Number of extensions: 3312
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)