Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8j19
(614 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 112 1e-24
AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens ... 69 1e-11
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 64 3e-10
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 64 4e-10
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 64 4e-10
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 64 4e-10
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 64 4e-10
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 64 4e-10
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 64 4e-10
BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein. 61 3e-09
BC048006-1|AAH48006.2| 665|Homo sapiens tetratricopeptide repea... 34 0.46
BC042848-1|AAH42848.1| 665|Homo sapiens tetratricopeptide repea... 34 0.46
BC033795-1|AAH33795.1| 665|Homo sapiens tetratricopeptide repea... 31 2.4
AK055552-1|BAB70953.1| 638|Homo sapiens protein ( Homo sapiens ... 31 2.4
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 30 5.6
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 30 5.6
AK000990-1|BAA91457.1| 535|Homo sapiens protein ( Homo sapiens ... 30 5.6
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 30 5.6
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 30 5.6
AK097651-1|BAC05132.1| 437|Homo sapiens protein ( Homo sapiens ... 30 7.5
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 112 bits (269), Expect = 1e-24
Identities = 60/150 (40%), Positives = 86/150 (57%)
Frame = +2
Query: 164 GREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKV 343
G + +I D L V G+ AP + V W+ F +GR V+DEARSGRP + E + V
Sbjct: 19 GWKNGEITDALRKVYGDNAPKKSAVYKWITRFKKGRDDVEDEARSGRPSTSICEEKINLV 78
Query: 344 HDIAVLADRRLKLSEIVDTTGISKERVHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQN 523
+ + DRRL I +TT IS + I++E+L + K S RWVP+ L DQ + R +
Sbjct: 79 RAL-IEEDRRLTAETIANTTDISIGSAYTILTEKLKLSKLSTRWVPKPLRPDQLQTRAEL 137
Query: 524 SKECLDRFQSNKADFLRRFVTKDETWVHYY 613
S E L+++ + FLRR VT DETW++ Y
Sbjct: 138 SMEILNKWDQDPEAFLRRIVTGDETWLYQY 167
>AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens
cDNA FLJ37770 fis, clone BRHIP2025448. ).
Length = 210
Score = 69.3 bits (162), Expect = 1e-11
Identities = 45/145 (31%), Positives = 74/145 (51%)
Frame = +2
Query: 167 REGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKVH 346
+ + + L G+ S A V +W F GR V+D+ARSGRP + T + + KV
Sbjct: 20 KSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDARSGRPVTHRTDDNIQKVK 79
Query: 347 DIAVLADRRLKLSEIVDTTGISKERVHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQNS 526
D+ V ++R+L + + + + KE V I+ E LN+ K SA+ + +L + K R +
Sbjct: 80 DL-VCSNRQLTVRMMAEELNLDKETVRLILKENLNMRKISAKVISGVLKGEPKP-RKLDF 137
Query: 527 KECLDRFQSNKADFLRRFVTKDETW 601
+ L + + LR+ VT ETW
Sbjct: 138 RSDLSKETRKNSSCLRKKVTGSETW 162
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 64.5 bits (150), Expect = 3e-10
Identities = 43/149 (28%), Positives = 71/149 (47%)
Frame = +2
Query: 164 GREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKV 343
GR+ + +NN G + TV+ W +F +G ++DE RSGRP V ++ A +
Sbjct: 21 GRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSEVDNDQLRAII 80
Query: 344 HDIAVLADRRLKLSEIVDTTGISKERVHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQN 523
+ R + VD + + V H+ +++ K +WVP L+ +QK R +
Sbjct: 81 EADPLTTTREVAEELNVDHSTV----VRHL--KQIGKVKKLDKWVPHELSENQKNRRFEV 134
Query: 524 SKECLDRFQSNKADFLRRFVTKDETWVHY 610
S + ++N FL R VT DE W+ Y
Sbjct: 135 SSSLI--LRNNNEPFLDRIVTCDEKWILY 161
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 64.1 bits (149), Expect = 4e-10
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Frame = +2
Query: 164 GREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKV 343
GR+ + +NN G + TV+ W +F +G ++DE RSGRP V ++ A +
Sbjct: 349 GRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSEVDNDQLRAII 408
Query: 344 HDIAVLADRRLKLSEIVDTTGISKER-VHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQ 520
AD E+ + ++ V H+ +++ K +WVP LT +QK R +
Sbjct: 409 E-----ADPLTTTREVAEELNVNHSTVVRHL--KQIEKVKKLDKWVPHELTENQKNRRFE 461
Query: 521 NSKECLDRFQSNKADFLRRFVTKDETWVHY 610
S + +++ FL R VT DE W+ Y
Sbjct: 462 VSSSLI--LRNHNEPFLDRIVTCDEKWILY 489
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 64.1 bits (149), Expect = 4e-10
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Frame = +2
Query: 164 GREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKV 343
GR+ + +NN G + TV+ W +F +G ++DE RSGRP V ++ A +
Sbjct: 22 GRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSEVDNDQLRAII 81
Query: 344 HDIAVLADRRLKLSEIVDTTGISKER-VHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQ 520
AD E+ + ++ V H+ +++ K +WVP LT +QK R +
Sbjct: 82 E-----ADPLTTTREVAEELNVNHSTVVRHL--KQIGKVKKLDKWVPHELTENQKNRRFE 134
Query: 521 NSKECLDRFQSNKADFLRRFVTKDETWVHY 610
S + +++ FL R VT DE W+ Y
Sbjct: 135 VSSSLI--LRNHNEPFLDRIVTCDEKWILY 162
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 64.1 bits (149), Expect = 4e-10
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Frame = +2
Query: 164 GREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKV 343
GR+ + +NN G + TV+ W +F +G ++DE RSGRP V ++ A +
Sbjct: 107 GRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSEVDNDQLRAII 166
Query: 344 HDIAVLADRRLKLSEIVDTTGISKER-VHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQ 520
AD E+ + ++ V H+ +++ K +WVP LT +QK R +
Sbjct: 167 E-----ADPLTTTREVAEELNVNHSTVVRHL--KQIGKVKKLDKWVPHELTENQKNRRFE 219
Query: 521 NSKECLDRFQSNKADFLRRFVTKDETWVHY 610
S + +++ FL R VT DE W+ Y
Sbjct: 220 VSSSLI--LRNHNEPFLDRIVTCDEKWILY 247
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 64.1 bits (149), Expect = 4e-10
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Frame = +2
Query: 164 GREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKV 343
GR+ + +NN G + TV+ W +F +G ++DE RSGRP V ++ A +
Sbjct: 349 GRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSEVDNDQLRAII 408
Query: 344 HDIAVLADRRLKLSEIVDTTGISKER-VHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQ 520
AD E+ + ++ V H+ +++ K +WVP LT +QK R +
Sbjct: 409 E-----ADPLTTTREVAEELNVNHSTVVRHL--KQIGKVKKLDKWVPHELTENQKNRRFE 461
Query: 521 NSKECLDRFQSNKADFLRRFVTKDETWVHY 610
S + +++ FL R VT DE W+ Y
Sbjct: 462 VSSSLI--LRNHNEPFLDRIVTCDEKWILY 489
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 64.1 bits (149), Expect = 4e-10
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Frame = +2
Query: 164 GREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKV 343
GR+ + +NN G + TV+ W +F +G ++DE RSGRP V ++ A +
Sbjct: 349 GRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSEVDNDQLRAII 408
Query: 344 HDIAVLADRRLKLSEIVDTTGISKER-VHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQ 520
AD E+ + ++ V H+ +++ K +WVP LT +QK R +
Sbjct: 409 E-----ADPLTTTREVAEELNVNHSTVVRHL--KQIGKVKKLDKWVPHELTENQKNRRFE 461
Query: 521 NSKECLDRFQSNKADFLRRFVTKDETWVHY 610
S + +++ FL R VT DE W+ Y
Sbjct: 462 VSSSLI--LRNHNEPFLDRIVTCDEKWILY 489
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 64.1 bits (149), Expect = 4e-10
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Frame = +2
Query: 164 GREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKV 343
GR+ + +NN G + TV+ W +F +G ++DE RSGRP V ++ A +
Sbjct: 349 GRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSEVDNDQLRAII 408
Query: 344 HDIAVLADRRLKLSEIVDTTGISKER-VHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQ 520
AD E+ + ++ V H+ +++ K +WVP LT +QK R +
Sbjct: 409 E-----ADPLTTTREVAEELNVNHSTVVRHL--KQIGKVKKLDKWVPHELTENQKNRRFE 461
Query: 521 NSKECLDRFQSNKADFLRRFVTKDETWVHY 610
S + +++ FL R VT DE W+ Y
Sbjct: 462 VSSSLI--LRNHNEPFLDRIVTCDEKWILY 489
>BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein.
Length = 254
Score = 60.9 bits (141), Expect = 3e-09
Identities = 38/124 (30%), Positives = 62/124 (50%)
Frame = +2
Query: 167 REGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKVH 346
+ + + L G+ S A V +W F GR V+D+ARSGRP + T + + KV
Sbjct: 20 KSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDARSGRPVTHRTDDNIQKVK 79
Query: 347 DIAVLADRRLKLSEIVDTTGISKERVHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQNS 526
D+ V ++R+L + + + + KE V I+ E LN+ K SA+ + +L + Q
Sbjct: 80 DL-VCSNRQLTVRMMAEELNLDKETVRLILKENLNMRKISAKVISGVLKETEPHYVAQAG 138
Query: 527 KECL 538
E L
Sbjct: 139 LELL 142
>BC048006-1|AAH48006.2| 665|Homo sapiens tetratricopeptide repeat
domain 30A protein.
Length = 665
Score = 33.9 bits (74), Expect = 0.46
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 584 LQIDVKNRPYYSENGPNILLSFAPEFFFDRA*AIAAPNEPITFKYLVPH 438
LQ ++ P+ E N+LL + +FD A + A N +T+K+L P+
Sbjct: 309 LQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPY 357
>BC042848-1|AAH42848.1| 665|Homo sapiens tetratricopeptide repeat
domain 30A protein.
Length = 665
Score = 33.9 bits (74), Expect = 0.46
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 584 LQIDVKNRPYYSENGPNILLSFAPEFFFDRA*AIAAPNEPITFKYLVPH 438
LQ ++ P+ E N+LL + +FD A + A N +T+K+L P+
Sbjct: 309 LQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPY 357
>BC033795-1|AAH33795.1| 665|Homo sapiens tetratricopeptide repeat
domain 30B protein.
Length = 665
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -1
Query: 584 LQIDVKNRPYYSENGPNILLSFAPEFFFDRA*AIAAPNEPITFKYLVPH 438
LQ ++ P+ E N+LL + +FD A + A N + +K+L P+
Sbjct: 309 LQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLIYKFLTPY 357
>AK055552-1|BAB70953.1| 638|Homo sapiens protein ( Homo sapiens
cDNA FLJ30990 fis, clone HLUNG1000037. ).
Length = 638
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -1
Query: 584 LQIDVKNRPYYSENGPNILLSFAPEFFFDRA*AIAAPNEPITFKYLVPH 438
LQ ++ P+ E N+LL + +FD A + A N + +K+L P+
Sbjct: 282 LQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLIYKFLTPY 330
>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 30.3 bits (65), Expect = 5.6
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +2
Query: 146 KVSSYEGREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTP 325
KVS + + I D+LN L + Y K + + + + R +V P
Sbjct: 748 KVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDV--SRLETVFVP 805
Query: 326 EMVAKVHDIAV---LADRRLKLSEIVDTTGISKERVHHIVSEELNI*K-*SARWVPRLLT 493
+ IA+ + + + +LSE+ G +E++H + SE N+ K S ++VP + T
Sbjct: 806 PEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVP-VKT 864
Query: 494 HDQKRIRVQNS 526
H++ ++ + ++
Sbjct: 865 HEEVKMTLNDT 875
>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 30.3 bits (65), Expect = 5.6
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +2
Query: 146 KVSSYEGREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTP 325
KVS + + I D+LN L + Y K + + + + R +V P
Sbjct: 748 KVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDV--SRLETVFVP 805
Query: 326 EMVAKVHDIAV---LADRRLKLSEIVDTTGISKERVHHIVSEELNI*K-*SARWVPRLLT 493
+ IA+ + + + +LSE+ G +E++H + SE N+ K S ++VP + T
Sbjct: 806 PEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVP-VKT 864
Query: 494 HDQKRIRVQNS 526
H++ ++ + ++
Sbjct: 865 HEEVKMTLNDT 875
>AK000990-1|BAA91457.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ10128 fis, clone HEMBA1002997, weakly similar to
CENTROMERIC PROTEIN E. ).
Length = 535
Score = 30.3 bits (65), Expect = 5.6
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +2
Query: 146 KVSSYEGREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTP 325
KVS + + I D+LN L + Y K + + + + R +V P
Sbjct: 96 KVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDV--SRLETVFVP 153
Query: 326 EMVAKVHDIAV---LADRRLKLSEIVDTTGISKERVHHIVSEELNI*K-*SARWVPRLLT 493
+ IA+ + + + +LSE+ G +E++H + SE N+ K S ++VP + T
Sbjct: 154 PEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVP-VKT 212
Query: 494 HDQKRIRVQNS 526
H++ ++ + ++
Sbjct: 213 HEEVKMTLNDT 223
>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
Length = 1416
Score = 30.3 bits (65), Expect = 5.6
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +2
Query: 146 KVSSYEGREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTP 325
KVS + + I D+LN L + Y K + + + + R +V P
Sbjct: 748 KVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDV--SRLETVFVP 805
Query: 326 EMVAKVHDIAV---LADRRLKLSEIVDTTGISKERVHHIVSEELNI*K-*SARWVPRLLT 493
+ IA+ + + + +LSE+ G +E++H + SE N+ K S ++VP + T
Sbjct: 806 PEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVP-VKT 864
Query: 494 HDQKRIRVQNS 526
H++ ++ + ++
Sbjct: 865 HEEVKMTLNDT 875
>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
Length = 1416
Score = 30.3 bits (65), Expect = 5.6
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +2
Query: 146 KVSSYEGREGEDIYDELNNVLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTP 325
KVS + + I D+LN L + Y K + + + + R +V P
Sbjct: 748 KVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDV--SRLETVFVP 805
Query: 326 EMVAKVHDIAV---LADRRLKLSEIVDTTGISKERVHHIVSEELNI*K-*SARWVPRLLT 493
+ IA+ + + + +LSE+ G +E++H + SE N+ K S ++VP + T
Sbjct: 806 PEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVP-VKT 864
Query: 494 HDQKRIRVQNS 526
H++ ++ + ++
Sbjct: 865 HEEVKMTLNDT 875
>AK097651-1|BAC05132.1| 437|Homo sapiens protein ( Homo sapiens
cDNA FLJ40332 fis, clone TESTI2031760. ).
Length = 437
Score = 29.9 bits (64), Expect = 7.5
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -1
Query: 158 MKKLYHGSLFNYIHSENT*RNIFSNDKKSIKFSRHEI-QI*NKG--GQRYE 15
+K + SLFN SE NI S KS+ S HE+ Q +KG G+R+E
Sbjct: 228 LKNISESSLFNETASETIYPNISSLRTKSVSISFHELEQDISKGSFGRRFE 278
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,890,804
Number of Sequences: 237096
Number of extensions: 1711670
Number of successful extensions: 11291
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 11226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11290
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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