Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8j19
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical...    58   7e-09
U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical pr...    56   3e-08
AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical ...    55   4e-08
AC006747-1|AAF60509.1|  311|Caenorhabditis elegans Hypothetical ...    46   2e-05
AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    28   6.1  
AF000298-7|AAC48256.1|  239|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical
           protein Y45G12C.13 protein.
          Length = 384

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
 Frame = +2

Query: 158 YEGREGEDIYDELNNV---LGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPE 328
           YE R G    +   N+   +GE A SY T K+W  +F  G   +++  RSGRP  +   +
Sbjct: 17  YEFRLGHSAMEAERNICGAMGEGALSYNTAKSWFQKFKNGDFSLEEIERSGRPVELNEED 76

Query: 329 MVAKVHDIAVLADRRLKLSEIVDTTGISKERVHHIVSEELNI*K*SAR---WVPRLLTHD 499
           +V  V +     + RL L E+ +      E  H  ++  L     +++   WVP  L+  
Sbjct: 77  LVKLVEE-----EPRLSLREMEE----KLECCHSTIARHLGRLGFTSKLGIWVPHELSAS 127

Query: 500 QKRIRVQNSKECLDRFQSNKADFLRRFVTKDETWVHY 610
           QK  RV    + L  F+  K D+L   VT DE WV Y
Sbjct: 128 QKLTRVNVCTQLL-TFR-RKFDWLNNLVTGDEKWVLY 162


>U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical
           protein R05G6.2 protein.
          Length = 339

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
 Frame = +2

Query: 158 YEGREGEDIYDELNNV---LGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPE 328
           YE R G    +   N+   +GE A SY T K+W  +   G   +++  RSGRP  +   +
Sbjct: 17  YEFRLGHSAMEAERNICGAMGEGALSYNTAKSWFQKLKNGDFSLEEIERSGRPVELNEED 76

Query: 329 MVAKVHDIAVLADRRLKLSEIVDTTGISKERVHHIVSEELNI*K*SARWVPRLLTHDQKR 508
           +V  V +     + RL L E+ +        +   +   L        WVP  L+  QK 
Sbjct: 77  LVKLVEE-----EPRLSLREMEEKLECCHSTIARHLG-RLGFTSKLGTWVPHELSASQKL 130

Query: 509 IRVQNSKECLDRFQSNKADFLRRFVTKDETWVHY 610
            RV    + L  F+  K D+L   VT DE WV Y
Sbjct: 131 TRVNVCTQLL-TFR-RKFDWLNNLVTGDEKWVLY 162


>AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical
           protein Y49F6A.4 protein.
          Length = 514

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 42/135 (31%), Positives = 61/135 (45%)
 Frame = +2

Query: 206 LGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKVHDIAVLADRRLKLS 385
           +GE A SY T K+W  +F  G   +++  RSGRP  +   ++V  V +     + RL L 
Sbjct: 11  MGEGALSYNTAKSWFQKFKNGDFSLEEIERSGRPVELNEEDLVKLVEE-----EPRLSLR 65

Query: 386 EIVDTTGISKERVHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQNSKECLDRFQSNKAD 565
           E+ +        +   +   L        WVP  L+  QK  RV    + L  F+  K D
Sbjct: 66  EMEEKLECCHSTIARHLG-RLGFTSKLGTWVPHELSASQKLTRVNVCTQLL-TFR-RKFD 122

Query: 566 FLRRFVTKDETWVHY 610
           +L   VT DE WV Y
Sbjct: 123 WLNNLVTGDEKWVLY 137


>AC006747-1|AAF60509.1|  311|Caenorhabditis elegans Hypothetical
           protein Y39A3A.1 protein.
          Length = 311

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 39/136 (28%), Positives = 59/136 (43%)
 Frame = +2

Query: 203 VLGECAPSYATVKNWVAEFNRGRTCVQDEARSGRPRSVTTPEMVAKVHDIAVLADRRLKL 382
           VLG+ + SY T+K W  +  +    + D+ RSGRPR     ++   + D     D R   
Sbjct: 4   VLGDNSVSYNTMKFWFEKIKKKNYDLDDKPRSGRPRLDIDEDISRALED-----DPRSMS 58

Query: 383 SEIVDTTGISKERVHHIVSEELNI*K*SARWVPRLLTHDQKRIRVQNSKECLDRFQSNKA 562
            EI  T       + + + E   + K   + VP  L+  QK +R   S   L R      
Sbjct: 59  REISATLKRPHTTIINHLHESGRVPK-FGQLVPHNLSDSQKNLRCDLSLSLLTR--KRTT 115

Query: 563 DFLRRFVTKDETWVHY 610
           D+++   T DE WV Y
Sbjct: 116 DWVKDITTGDEKWVLY 131


>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -1

Query: 242 FLL*HKKEHIHPKHYLTRHRYLPLHALHMKKLYHGSLFNYIHSENT*RNIFSNDKKS--- 72
           FL   KK + H +     + +     +  KK +  +LF ++   N  ++IFSN KKS   
Sbjct: 307 FLNIFKKNYYHIRKIRFFNFFYISKKILTKKFFKKNLFFFLIFNNLEKSIFSNFKKSNTF 366

Query: 71  IKFSRHEI 48
            +FS+++I
Sbjct: 367 FQFSKNKI 374


>AF000298-7|AAC48256.1|  239|Caenorhabditis elegans Hypothetical
           protein W03D2.2 protein.
          Length = 239

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 14  IRISGHLCFKFEFHGVKILLIFCHLKIYFVKCFQNG 121
           ++I   +CF F  +  K ++   +LK+Y +KC   G
Sbjct: 55  MKIKDLICFSFTSNFAKNIVGALNLKLYDIKCMMGG 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,063,877
Number of Sequences: 27780
Number of extensions: 295076
Number of successful extensions: 744
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)