Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8j10
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67954-8|AAB52608.2| 782|Caenorhabditis elegans Sulfate permeas... 29 2.6
AY954524-1|AAX34432.2| 762|Caenorhabditis elegans anion transpo... 29 2.6
AY887909-1|AAX34421.1| 782|Caenorhabditis elegans anion transpo... 29 2.6
Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF039053-2|AAC25877.3| 294|Caenorhabditis elegans Serpentine re... 28 4.5
AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical ... 27 7.9
AC006722-17|ABP57812.1| 141|Caenorhabditis elegans Hypothetical... 27 7.9
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 27 7.9
>U67954-8|AAB52608.2| 782|Caenorhabditis elegans Sulfate permease
family protein 3 protein.
Length = 782
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 463 LKSSLESVQCTGIRCFSICSKT-LQKLVNSTNRYQL 567
LKS +Q GI+CF + K+ L+KL +T+ Y++
Sbjct: 648 LKSVYVDLQAAGIQCFFVVQKSDLKKLFRATDFYEV 683
>AY954524-1|AAX34432.2| 762|Caenorhabditis elegans anion
transporter SULP-3b protein.
Length = 762
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 463 LKSSLESVQCTGIRCFSICSKT-LQKLVNSTNRYQL 567
LKS +Q GI+CF + K+ L+KL +T+ Y++
Sbjct: 628 LKSVYVDLQAAGIQCFFVVQKSDLKKLFRATDFYEV 663
>AY887909-1|AAX34421.1| 782|Caenorhabditis elegans anion
transporter SULP-3a protein.
Length = 782
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 463 LKSSLESVQCTGIRCFSICSKT-LQKLVNSTNRYQL 567
LKS +Q GI+CF + K+ L+KL +T+ Y++
Sbjct: 648 LKSVYVDLQAAGIQCFFVVQKSDLKKLFRATDFYEV 683
>Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 387 YPDTVLMILSKFPLEIEVWNDDENEVEIFVGIGTMHWDTMFFHMLKDTA 533
Y DT+ ++ FP +W + N VE + H FF + TA
Sbjct: 315 YKDTIAQVVRSFPSVTFIWKYENNNVEFAENLPNFH----FFKWVPQTA 359
>Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 387 YPDTVLMILSKFPLEIEVWNDDENEVEIFVGIGTMHWDTMFFHMLKDTA 533
Y DT+ ++ FP +W + N VE + H FF + TA
Sbjct: 315 YKDTIAQVVRSFPSVTFIWKYENNNVEFAENLPNFH----FFKWVPQTA 359
>AF039053-2|AAC25877.3| 294|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 20 protein.
Length = 294
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = -1
Query: 235 ILIIKFLSAPLFSFSSDAKTVTLSMNISIRYICSMTANWSLVRSYAAILIIVHTEILFCN 56
+L+ FL++ + F+ K + + + I YI + +N + VRS + I V +
Sbjct: 52 VLVAAFLTSDIIYFTFSEK-MDSQLIVVIFYIPLLASNVAAVRSIVILFISVERVVASYF 110
Query: 55 PLYCFRHGPNRIMTF 11
P++ H R F
Sbjct: 111 PIFFHNHRKFRFKVF 125
>AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical
protein Y45G12C.8 protein.
Length = 287
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -1
Query: 247 GPNFILIIKFLSAPLFSFSSDAKTVTLSMNISIRYICSMTANWSLVRSYAAILIIVHTEI 68
G + I++ +++ S+ + ++ NI+ + ++ S +RS A+LI + I
Sbjct: 50 GLDAIIMFFMFFVEIYNLSTSYRVNLITKNIAFLLVWPSSSTAS-IRSTLALLISISRVI 108
Query: 67 LFCNPLYCFRHGPNRIMTF 11
C P++ FR +I+ F
Sbjct: 109 AACFPIF-FRRYQEKIIKF 126
>AC006722-17|ABP57812.1| 141|Caenorhabditis elegans Hypothetical
protein Y19D10A.17 protein.
Length = 141
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -1
Query: 247 GPNFILIIKFLSAPLFSFSSDAKTVTLSMNISIRYICSMTANWSLVRSYAAILIIVHTEI 68
G + I++ +++ S+ + ++ NI+ + ++ S +RS A+LI + I
Sbjct: 50 GLDAIIMFFMFFVEIYNLSTSYRVNLITKNIAFLLVWPSSSTAS-IRSTLALLISISRVI 108
Query: 67 LFCNPLYCFRHGPNRIMTF 11
C P++ FR +I+ F
Sbjct: 109 AACFPIF-FRRYQEKIIKF 126
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = -3
Query: 284 CQLTFL-DDEL------HFRTEFYFDNQILVCSALFVLVRRKNCHFVNEY 156
CQ TF +D+L H + +FD +L CS FV H VN +
Sbjct: 96 CQRTFFREDQLQRHLHNHLKERSHFDCPVLNCSMQFVFYEGVENHLVNHH 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,164,240
Number of Sequences: 27780
Number of extensions: 335690
Number of successful extensions: 977
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -