Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8j08
         (580 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       24   3.1  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   4.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.2  

>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +1

Query: 127 NSRRLQRMPIAL*LHQKLYSVLQRRISGHSLQSSSTYPMI--FQTP*DAVLAIGQPPRPI 300
           N+R L+ + + L L+++   +L  +I     + S  +     +QTP DAV  +G+ P  I
Sbjct: 267 NNRWLRTISVILFLNKQ--DLLAEKIKAGKSKLSDYFGEFNRYQTPADAVCEMGEDPEVI 324

Query: 301 AA 306
            A
Sbjct: 325 RA 326


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 238 PMIFQTP*DAVLAIGQPPRPIAA 306
           P+ +Q     V  IG PPRP+ A
Sbjct: 155 PLTYQMFLHTVNIIGDPPRPVGA 177


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 222 VK*HISNDFPDTIRCCV 272
           +K  I N F  TIRCCV
Sbjct: 376 IKALIGNLFAQTIRCCV 392


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 223  SSSTYPMIFQTP 258
            S++TYP IF+TP
Sbjct: 1114 SATTYPSIFKTP 1125


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,928
Number of Sequences: 2352
Number of extensions: 12797
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)