Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8j06
(551 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4SF11 Cluster: Chromosome 1 SCAF14609, whole genome sh... 173 2e-42
UniRef50_Q92900 Cluster: Regulator of nonsense transcripts 1; n=... 157 2e-37
UniRef50_Q9FJR0 Cluster: Regulator of nonsense transcripts 1 hom... 88 1e-16
UniRef50_O76512 Cluster: Regulator of nonsense transcripts 1; n=... 86 6e-16
UniRef50_A6S6M8 Cluster: Putative uncharacterized protein; n=3; ... 75 1e-12
UniRef50_Q5KKH8 Cluster: ATP dependent helicase, putative; n=4; ... 74 2e-12
UniRef50_Q9HEH1 Cluster: Regulator of nonsense transcripts 1 hom... 73 6e-12
UniRef50_Q54I89 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q24GG1 Cluster: Phage head-tail adaptor, putative famil... 63 5e-09
UniRef50_P30771 Cluster: ATP-dependent helicase NAM7; n=9; Sacch... 59 8e-08
UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of str... 58 1e-07
UniRef50_Q8IJY4 Cluster: Regulator of nonsense transcripts, puta... 57 2e-07
UniRef50_Q582F1 Cluster: Regulator of nonsense transcripts 1, pu... 56 7e-07
UniRef50_UPI00004990F6 Cluster: regulator of nonsense transcript... 45 0.001
UniRef50_A2E7Q0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.038
UniRef50_A2DPW5 Cluster: Regulator of nonsense transcripts 1, pu... 39 0.067
UniRef50_A0C1B9 Cluster: Chromosome undetermined scaffold_141, w... 35 1.1
UniRef50_Q10MT9 Cluster: Expressed protein; n=2; Oryza sativa|Re... 35 1.4
UniRef50_A2F3Q0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.9
UniRef50_UPI0000498BF0 Cluster: regulator of nonsense transcript... 34 2.5
UniRef50_Q9AA52 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_Q8RW97 Cluster: At1g17340/F28G4_6; n=3; Arabidopsis tha... 33 3.3
UniRef50_A2EAT3 Cluster: Regulator of nonsense transcripts 1, pu... 33 3.3
UniRef50_Q9N5S3 Cluster: Laterally symmetric (Defective in later... 33 4.4
UniRef50_Q54FA9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q8SR02 Cluster: INVOLVED IN mRNA DECAY CONTROL; n=1; En... 33 4.4
UniRef50_A7ER42 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q06A28 Cluster: Ribonucleoside-diphosphate reductase; n... 33 5.8
UniRef50_A0DWG1 Cluster: Chromosome undetermined scaffold_67, wh... 33 5.8
UniRef50_Q7X2U2 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_A7C0D3 Cluster: Beta transducin-like protein; n=1; Begg... 32 7.7
UniRef50_A6CYJ7 Cluster: Putative glycoporin; n=3; Vibrio|Rep: P... 32 7.7
UniRef50_A3VWJ7 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_A0YKA7 Cluster: Pentapeptide repeat; n=1; Lyngbya sp. P... 32 7.7
UniRef50_Q00YV3 Cluster: DNA polymerase; n=2; Ostreococcus|Rep: ... 32 7.7
UniRef50_Q54MH8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_Q54HC5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_A4VDB0 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_Q1E1X4 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
>UniRef50_Q4SF11 Cluster: Chromosome 1 SCAF14609, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1186
Score = 173 bits (422), Expect = 2e-42
Identities = 81/141 (57%), Positives = 99/141 (70%), Gaps = 4/141 (2%)
Frame = +3
Query: 141 MSVEAFDPSSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQHDHGLSSSNQ 320
MSVEA+ PSSQ+LTFL+TEE + +GADTQGSE++FTDFTLPSQ+QTQ NQ
Sbjct: 1 MSVEAYGPSSQTLTFLDTEETELLGADTQGSEYDFTDFTLPSQTQTQGHTQSQ---LDNQ 57
Query: 321 VNGIGRI----ELSSKISNVTNTIPELQFEEEDEALYSNKELPDHACKYCGIHDPATVVM 488
+NG + L ++ + + EL FEE++E Y K+LP HAC YCGIHDPA VV
Sbjct: 58 INGPDDLLHNGGLDDSVAKASQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVY 117
Query: 489 CNICNKWFCNGRGNTSGSHII 551
CN KWFCNGRGNTSGSHI+
Sbjct: 118 CNTSKKWFCNGRGNTSGSHIV 138
>UniRef50_Q92900 Cluster: Regulator of nonsense transcripts 1; n=47;
Eukaryota|Rep: Regulator of nonsense transcripts 1 -
Homo sapiens (Human)
Length = 1129
Score = 157 bits (380), Expect = 2e-37
Identities = 81/157 (51%), Positives = 100/157 (63%), Gaps = 20/157 (12%)
Frame = +3
Query: 141 MSVEAFDPSSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQHDH------- 299
MSVEA+ PSSQ+LTFL+TEE + +GADTQGSEFEFTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 60
Query: 300 -------GLSSSN---QVNGIGRIE---LSSKISNVTNTIPELQFEEEDEALYSNKELPD 440
G ++ QV G ++ + ++ + + EL FEE++E Y K+LP
Sbjct: 61 GPGGAGAGAAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPI 120
Query: 441 HACKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
HAC YCGIHDPA VV CN KWFCNGRGNTSGSHI+
Sbjct: 121 HACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIV 157
>UniRef50_Q9FJR0 Cluster: Regulator of nonsense transcripts 1
homolog; n=12; Eukaryota|Rep: Regulator of nonsense
transcripts 1 homolog - Arabidopsis thaliana (Mouse-ear
cress)
Length = 1254
Score = 87.8 bits (208), Expect = 1e-16
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Frame = +3
Query: 321 VNGIGRIELSSKISNVTNTIPELQFEE--EDEAL-YSNKELPDHACKYCGIHDPATVVMC 491
V G G + SS++ + + L FEE +D+ Y + +HACKYCGI +PA VV C
Sbjct: 95 VGGSGGVSSSSQVDALAAGVGNLNFEETGDDDGFDYGKNDFTEHACKYCGISNPACVVRC 154
Query: 492 NI--CNKWFCNGRGNTSGSHII 551
N+ C KWFCN RGNTSGSHI+
Sbjct: 155 NVASCRKWFCNSRGNTSGSHIV 176
>UniRef50_O76512 Cluster: Regulator of nonsense transcripts 1; n=4;
Bilateria|Rep: Regulator of nonsense transcripts 1 -
Caenorhabditis elegans
Length = 1069
Score = 85.8 bits (203), Expect = 6e-16
Identities = 44/127 (34%), Positives = 70/127 (55%)
Frame = +3
Query: 171 QSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQHDHGLSSSNQVNGIGRIELS 350
++LTF++ E+ +TQ S+F + F++P+QS +QA+ G + N + ++
Sbjct: 14 ETLTFVDPEDDGVSIGNTQDSQFAYEQFSVPTQS-SQATDLLPG-GTDGTTNDLPFHDVE 71
Query: 351 SKISNVTNTIPELQFEEEDEALYSNKELPDHACKYCGIHDPATVVMCNICNKWFCNGRGN 530
S+ ++ E Q E++ LP+HAC+YCGI DP V C +C KWFCN
Sbjct: 72 DDESDSEKSLTEEQHEQK---------LPEHACRYCGISDPLCVAKCTVCRKWFCNSNDG 122
Query: 531 TSGSHII 551
TSG HI+
Sbjct: 123 TSGGHIV 129
>UniRef50_A6S6M8 Cluster: Putative uncharacterized protein; n=3;
Ascomycota|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 1100
Score = 74.5 bits (175), Expect = 1e-12
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +3
Query: 414 LYSNKELPDHACKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
L KELP HAC YCGIH P+ VV C CNKWFC+ RGN + SHI+
Sbjct: 88 LEDEKELPAHACAYCGIHSPSCVVKCLGCNKWFCSARGNATSSHIV 133
>UniRef50_Q5KKH8 Cluster: ATP dependent helicase, putative; n=4;
Dikarya|Rep: ATP dependent helicase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1090
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/53 (62%), Positives = 37/53 (69%)
Frame = +3
Query: 393 FEEEDEALYSNKELPDHACKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
F+EE E S E +HAC YCGIH+P VV C CNKWFCN RGNTS SHI+
Sbjct: 67 FDEEIER-NSFGEGVEHACSYCGIHNPQCVVKCLHCNKWFCNSRGNTSASHIV 118
>UniRef50_Q9HEH1 Cluster: Regulator of nonsense transcripts 1
homolog; n=3; Fungi/Metazoa group|Rep: Regulator of
nonsense transcripts 1 homolog - Neurospora crassa
Length = 1093
Score = 72.5 bits (170), Expect = 6e-12
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +3
Query: 408 EALYSNKELPDHACKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
+A KELP HAC YCGIH P++VV C CNKWFC+ +G+ SHI+
Sbjct: 90 DAPVEEKELPPHACAYCGIHSPSSVVKCLTCNKWFCSAKGSAFSSHIV 137
>UniRef50_Q54I89 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1331
Score = 67.7 bits (158), Expect = 2e-10
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Frame = +3
Query: 126 NSSLKMSVEAFDPSSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQ---HD 296
N++ K E D + ++ ++ + G ++ E E D + + + S+ +D
Sbjct: 74 NNNNKNQFEDDDEDQEEEEYISGDDLNNNGQESDDYEEEEEDDDEDEEEEDEESKKLNYD 133
Query: 297 H--GLSSSNQVNGIGRIELSSKISNVTNTI--PELQFEEEDEALYSNKELPDHACKYCGI 464
G + S+ ++ + ++S+I + + +L FEE E + ELP HAC YC
Sbjct: 134 SFFGANMSHNMDFLNSQNINSQIGLMDPHLHSSQLNFEEPQEEI----ELPAHACAYCAT 189
Query: 465 HDPATVVMCN--ICNKWFCNGRGNTSGSHII 551
H+ +TVV C C KWFCNG+G T SHII
Sbjct: 190 HELSTVVKCMHPSCGKWFCNGKGKTKSSHII 220
>UniRef50_Q24GG1 Cluster: Phage head-tail adaptor, putative family
protein; n=1; Tetrahymena thermophila SB210|Rep: Phage
head-tail adaptor, putative family protein - Tetrahymena
thermophila SB210
Length = 1112
Score = 62.9 bits (146), Expect = 5e-09
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = +3
Query: 396 EEEDEALYSN-KELPDHACKYCGIHDPATVVMC--NICNKWFCNGRGNTSG-SHII 551
E EDE + K LP HAC+YCG+H+ +V+ C CNKWFCNG+ G SHII
Sbjct: 78 ENEDEVFDIDFKNLPSHACEYCGVHNKNSVIKCLNKDCNKWFCNGKQQGQGASHII 133
>UniRef50_P30771 Cluster: ATP-dependent helicase NAM7; n=9;
Saccharomycetales|Rep: ATP-dependent helicase NAM7 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 971
Score = 58.8 bits (136), Expect = 8e-08
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +3
Query: 306 SSSNQVNGIGRIELSSKISNVTNTIPELQFEEED--EALYSNKELPDHACKYCGIHDPAT 479
+S + VN +L+S + + +L FEE E + + D++C YCGI
Sbjct: 14 NSPSDVNVQPATQLNSTLVEDDDVDNQL-FEEAQVTETGFRSPSASDNSCAYCGIDSAKC 72
Query: 480 VVMCNICNKWFCNGRGNTSGSHII 551
V+ CN C KWFCN + TS SHI+
Sbjct: 73 VIKCNSCKKWFCNTKNGTSSSHIV 96
>UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 964
Score = 58.0 bits (134), Expect = 1e-07
Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 426 KELPDHACKYCGIHDPATVVMCNICNKWFCNGRGNT-SGSHII 551
K P HAC YCG PA+VV C NKWFCNG+G + + SHI+
Sbjct: 54 KARPAHACVYCGESSPASVVRCLTTNKWFCNGKGGSLNSSHIV 96
>UniRef50_Q8IJY4 Cluster: Regulator of nonsense transcripts,
putative; n=8; Plasmodium|Rep: Regulator of nonsense
transcripts, putative - Plasmodium falciparum (isolate
3D7)
Length = 1554
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +3
Query: 393 FEEEDEALYSNKELPD----HACKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
+EE + Y NK+ D + C+YC I +VV CN C +WFCNG T GSHI+
Sbjct: 226 YEEGNNYRYKNKKSKDDLKYYRCRYCEIDSIDSVVQCNNCKRWFCNGSYGTCGSHIV 282
>UniRef50_Q582F1 Cluster: Regulator of nonsense transcripts 1,
putative; n=2; Trypanosoma|Rep: Regulator of nonsense
transcripts 1, putative - Trypanosoma brucei
Length = 842
Score = 55.6 bits (128), Expect = 7e-07
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +3
Query: 444 ACKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
+C YC P + CN C+KWFCNG TSGSHII
Sbjct: 29 SCSYCSEESPTCLAFCNGCSKWFCNGSNGTSGSHII 64
>UniRef50_UPI00004990F6 Cluster: regulator of nonsense transcripts
1; n=1; Entamoeba histolytica HM-1:IMSS|Rep: regulator
of nonsense transcripts 1 - Entamoeba histolytica
HM-1:IMSS
Length = 937
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3
Query: 447 CKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
C YCG+ D ++ C C K+FCNG GN SHII
Sbjct: 11 CWYCGLADKKKLIRCG-CGKYFCNGTGNGKVSHII 44
>UniRef50_A2E7Q0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 616
Score = 39.9 bits (89), Expect = 0.038
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 447 CKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
C+YCG ++ C +FCNG+G+T SH++
Sbjct: 7 CQYCGCEAEGSLAQCAATGLYFCNGKGDTLQSHLV 41
>UniRef50_A2DPW5 Cluster: Regulator of nonsense transcripts 1,
putative; n=1; Trichomonas vaginalis G3|Rep: Regulator
of nonsense transcripts 1, putative - Trichomonas
vaginalis G3
Length = 882
Score = 39.1 bits (87), Expect = 0.067
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 447 CKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
C YC P +V +WFCNGRG SHII
Sbjct: 48 CSYCLCDIPECLVKDKAIGRWFCNGRGKALHSHII 82
>UniRef50_A0C1B9 Cluster: Chromosome undetermined scaffold_141,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_141,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 935
Score = 35.1 bits (77), Expect = 1.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 453 YCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
YC D V C C +W+CN SGSHII
Sbjct: 34 YCLQSDVNAVAQCLTCKRWYCNS-ATKSGSHII 65
>UniRef50_Q10MT9 Cluster: Expressed protein; n=2; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 899
Score = 34.7 bits (76), Expect = 1.4
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 WKYQPIVVLYIFFWI--NFVCLNSSLKMSVEAFDPSSQSLTFLETEEGDFIGADTQGSEF 239
W PIV Y+ FV S L++ V+AF+ S+++ FLE DF+ ADT G E
Sbjct: 329 WLLHPIVSPYMVDDSIGKFVGFASQLQLLVKAFESSAEA-QFLE----DFVAADTSGQEN 383
Query: 240 EFTDFTLPSQS 272
+ T+P S
Sbjct: 384 SKSTVTVPPPS 394
>UniRef50_A2F3Q0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 442
Score = 34.3 bits (75), Expect = 1.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 444 ACKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
AC CG +P+ + C FCNG+ N SH +
Sbjct: 4 ACALCGCSNPSCLYHCPRTQMCFCNGKSNQKQSHAL 39
>UniRef50_UPI0000498BF0 Cluster: regulator of nonsense transcripts;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: regulator of
nonsense transcripts - Entamoeba histolytica HM-1:IMSS
Length = 909
Score = 33.9 bits (74), Expect = 2.5
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 348 SSKISNVTNTIPELQFEEEDEALYSNKELPDHACKYCGIHDPATVVMCNICNKWFCNGR- 524
SS + NT EL++ E + N C CG V++C CNK+FCNG
Sbjct: 41 SSSSESPDNTEDELEYSSESDLNNQNNR-----CCLCG--SIKGVLLCIKCNKYFCNGPV 93
Query: 525 GNTSGSHII 551
N+S +I
Sbjct: 94 YNSSNCQVI 102
>UniRef50_Q9AA52 Cluster: Putative uncharacterized protein; n=1;
Caulobacter vibrioides|Rep: Putative uncharacterized
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 318
Score = 33.5 bits (73), Expect = 3.3
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = -1
Query: 521 AITEPLVAYVTHNDCGRVVYATVFTSMIWKF-LVAVQSLIFLFELQLRYRISHVRDFRRQ 345
+++ L+ +VT R++ +T T MIW+ L V++ ++L + +RY +S + +
Sbjct: 194 SLSPRLLLFVTSAHTLRIIVSTALTVMIWRMALPEVEAQLWLVLMAVRYLVSRIPLLANK 253
Query: 344 --FYTSYSVNLVG*RQPM-VML*SLCLA 270
+ + V L+G + P+ V+L +L LA
Sbjct: 254 DLVFGNLMVFLLGPQAPVAVLLAALALA 281
>UniRef50_Q8RW97 Cluster: At1g17340/F28G4_6; n=3; Arabidopsis
thaliana|Rep: At1g17340/F28G4_6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 785
Score = 33.5 bits (73), Expect = 3.3
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 479 CGRVVYATVFTSMIWKFLVAVQSLIFLFELQLRY-RISHVRDFRRQFYTSYSVNLV 315
CG VY + MI ++QS + E +LRY ++ V D + FY SY+ +L+
Sbjct: 121 CGHTVYGIAESQMIAIPHPSIQSKVAKSEAELRYKKLLSVVDLSKNFYFSYTYHLM 176
>UniRef50_A2EAT3 Cluster: Regulator of nonsense transcripts 1,
putative; n=1; Trichomonas vaginalis G3|Rep: Regulator
of nonsense transcripts 1, putative - Trichomonas
vaginalis G3
Length = 803
Score = 33.5 bits (73), Expect = 3.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 447 CKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHI 548
C YCG + + C +FCNG+G SHI
Sbjct: 6 CAYCGCSEAECLAEVPECGLYFCNGKGVIPQSHI 39
>UniRef50_Q9N5S3 Cluster: Laterally symmetric (Defective in lateral
asymmetry) protein 2, isoform a; n=3;
Caenorhabditis|Rep: Laterally symmetric (Defective in
lateral asymmetry) protein 2, isoform a - Caenorhabditis
elegans
Length = 365
Score = 33.1 bits (72), Expect = 4.4
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +3
Query: 255 TLPSQSQTQASQHDHGLSSSNQVNGIGRIELSSKISNVTNTIPELQFEEEDEALYSNKEL 434
T + Q+Q + D LS N + S N E+ +E+D + Y
Sbjct: 3 TRRNAKQSQRNSADQSLSEFNSSSMTHGSNQSVYHHNQHMDDSEMMMDEQDYSQYQ-MGF 61
Query: 435 PDHACKYCGIHDPATVVMCNICNKWFCNGRG 527
P+ G+ P V CN+CNK F + +G
Sbjct: 62 PEEDEMVEGMMTPRAVHQCNVCNKIFVSYKG 92
>UniRef50_Q54FA9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 344
Score = 33.1 bits (72), Expect = 4.4
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = -1
Query: 518 ITEPLVAYVTHNDCGRVVYATVFTSMIWKFLVAVQSLIFLFELQLRYR 375
I+ P++AY+ H D V++ +VF+ F + Q +I +F +++ YR
Sbjct: 157 ISSPIIAYINHLDMKTVLFLSVFSFWALSFQLIGQKMISVFGIRI-YR 203
>UniRef50_Q8SR02 Cluster: INVOLVED IN mRNA DECAY CONTROL; n=1;
Encephalitozoon cuniculi|Rep: INVOLVED IN mRNA DECAY
CONTROL - Encephalitozoon cuniculi
Length = 782
Score = 33.1 bits (72), Expect = 4.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 447 CKYCGIHDPATVVMCNICNKWFCNGRGNTSGSHII 551
C+YC + ++ C C K FCN R +S SHI+
Sbjct: 9 CQYCEAAE--LLIECITCGKCFCNSRSASSISHIV 41
>UniRef50_A7ER42 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 624
Score = 33.1 bits (72), Expect = 4.4
Identities = 23/99 (23%), Positives = 41/99 (41%)
Frame = +3
Query: 132 SLKMSVEAFDPSSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQHDHGLSS 311
S+ + PSS ++ ++ +E G DT+ S++ S+S + +S + S
Sbjct: 490 SVLQEIMFIGPSSPNIRYVLVDEAFIKGIDTESSQYPTPASFSSSKSTSISSSNIENSIS 549
Query: 312 SNQVNGIGRIELSSKISNVTNTIPELQFEEEDEALYSNK 428
++G G L S I E E+E+E K
Sbjct: 550 REAIDGNGETRLPRCFSRNQRNIFEEALEQEEEVWKQRK 588
>UniRef50_Q06A28 Cluster: Ribonucleoside-diphosphate reductase; n=3;
Murid herpesvirus 1|Rep: Ribonucleoside-diphosphate
reductase - Murid herpesvirus 1 (Murine cytomegalovirus)
Length = 1174
Score = 32.7 bits (71), Expect = 5.8
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +1
Query: 184 FWKQRKGTLLEQT-LKALSLSSRILHYPLRA----RHRLHNMTMGCLHPTRLTE*DV*NC 348
FW +R LEQT L ++L +R+ HRLH + CL R E V N
Sbjct: 1011 FWPRRDNVFLEQTPLMMTPTKDQMLDECVRSVKIEPHRLHEEDLSCLGENRPVELPVLNS 1070
Query: 349 RLKSLT 366
RL+ ++
Sbjct: 1071 RLRQIS 1076
>UniRef50_A0DWG1 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2008
Score = 32.7 bits (71), Expect = 5.8
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 267 QSQTQASQHDHGLSSSNQVNGIGRIELSSKISNVT--NTIPELQF-EEEDEALYSNKELP 437
Q Q A Q + + + I I+ + K S N PEL+F EDE YSN+ELP
Sbjct: 594 QKQDTADQQINQFINQRRNAVISYIDATEKSSQKVKQNLSPELKFCRVEDEIQYSNEELP 653
Query: 438 D 440
D
Sbjct: 654 D 654
>UniRef50_Q7X2U2 Cluster: Putative uncharacterized protein; n=1;
uncultured Acidobacteria bacterium|Rep: Putative
uncharacterized protein - uncultured Acidobacteria
bacterium
Length = 1064
Score = 32.3 bits (70), Expect = 7.7
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 159 DPSSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQHDHGLSSSNQVNGIGR 338
DP+ + L + TE G + D G ++ LP+ S HD+ L ++ G+
Sbjct: 658 DPTREGLVYAGTETGAHVSYDG-GDHWQTLQLNLPTVSVRDLQVHDNDLVAATYGRGLWS 716
Query: 339 IELSSKISNVTNTI 380
++ S + N + I
Sbjct: 717 LDNLSPLRNADDKI 730
>UniRef50_A7C0D3 Cluster: Beta transducin-like protein; n=1;
Beggiatoa sp. PS|Rep: Beta transducin-like protein -
Beggiatoa sp. PS
Length = 627
Score = 32.3 bits (70), Expect = 7.7
Identities = 18/69 (26%), Positives = 38/69 (55%)
Frame = +3
Query: 123 LNSSLKMSVEAFDPSSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQHDHG 302
L++S +++ +D ++ ETE G+ G +T+GSE E ++ S+T+ ++ + G
Sbjct: 317 LSASYDNTIKLWDLTATPTETDETESGETEGNETEGSETEGSE---TEGSETEGNETESG 373
Query: 303 LSSSNQVNG 329
+ N+ G
Sbjct: 374 ETEGNETEG 382
>UniRef50_A6CYJ7 Cluster: Putative glycoporin; n=3; Vibrio|Rep:
Putative glycoporin - Vibrio shilonii AK1
Length = 379
Score = 32.3 bits (70), Expect = 7.7
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 165 SSQSLTFLETEEGDF-IGADTQGSEFEFTDFTLPSQSQTQASQHDHGLSSSNQV 323
++ ++ ++ E G F IG D + +F + +F P+Q Q +Q D+ S S ++
Sbjct: 20 ANAGISIVDNETGSFSIGGDVE-FDFNYENFDRPNQDQRPNAQDDYNFSQSGRI 72
>UniRef50_A3VWJ7 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. 217|Rep: Putative uncharacterized protein
- Roseovarius sp. 217
Length = 1085
Score = 32.3 bits (70), Expect = 7.7
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +1
Query: 169 RNRSRFWKQRKGTLLEQTL--KALSLSSRILHYPLRARHRLH 288
RNRS FW + G +E+++ K S+++ + H+ + HR++
Sbjct: 877 RNRSLFWVPKLGNSIERSILEKITSINTNVSHFVSKTDHRIY 918
>UniRef50_A0YKA7 Cluster: Pentapeptide repeat; n=1; Lyngbya sp. PCC
8106|Rep: Pentapeptide repeat - Lyngbya sp. PCC 8106
Length = 156
Score = 32.3 bits (70), Expect = 7.7
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 165 SSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQHDHGLSSSNQVNGIGRIE 344
S L+ L D GAD G+ TD + + + +Q D ++ +QVN IG
Sbjct: 28 SGVDLSQLNLSRADLSGADLSGANLSGTDLSQANLTDADLNQADLRSANLSQVNLIGASL 87
Query: 345 LSSKISNVTNTIPELQ 392
+ + + V T +L+
Sbjct: 88 IEANMGRVNLTRADLR 103
>UniRef50_Q00YV3 Cluster: DNA polymerase; n=2; Ostreococcus|Rep: DNA
polymerase - Ostreococcus tauri
Length = 2339
Score = 32.3 bits (70), Expect = 7.7
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Frame = +2
Query: 11 HVEFSSRFVCRLNNCVTAMEISANSRSIYFLLD*FCLFKFVIK--NEC*SIRPKLA---- 172
HV+ + RF+ + CV A++ + R++ + + + F +K E S PKL
Sbjct: 1454 HVDLADRFIYNVG-CVMAVKKTEQKRALEISDNTYSMDMFQMKATGEISSYLPKLCHIGF 1512
Query: 173 -IAHVSGNRGRGLYWSRHSR 229
A ++G++GRG+Y +SR
Sbjct: 1513 YFAGIAGDKGRGIYVLHNSR 1532
>UniRef50_Q54MH8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 808
Score = 32.3 bits (70), Expect = 7.7
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 243 FTDFTLPS-QSQTQASQ--HDHGLSSSNQVNGIGRIELSSKISNVTNTIPELQFEEEDEA 413
F D + PS QSQ+Q+S LSS N + GI I S +S ++ + E+
Sbjct: 548 FQDNSSPSSQSQSQSSSISQSASLSSENMIYGIQSINGSDSVSRPSHENTIVNVEDHPYF 607
Query: 414 LYSNKEL 434
+YS KE+
Sbjct: 608 IYSVKEM 614
>UniRef50_Q54HC5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 778
Score = 32.3 bits (70), Expect = 7.7
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +3
Query: 111 NFVCLNSSLKMSVEAFDPSSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQ 290
NF+ NS++ E P F+ + FI D SEF FT L QSQ +
Sbjct: 195 NFLAPNSTINKDCEIILPYKYLKEFIVSCYKSFINIDILISEFYFTKKWLVKQSQNK--N 252
Query: 291 HDHGLSSSNQVNGIGRIELSSK----ISNVTNTIPELQFEEEDE 410
+D G++++ I R + + I TN ++ E+ ++
Sbjct: 253 YDFGITNTITFKSIPRDQFEAMKPFIIKKSTNLKLSMEIEDHNK 296
>UniRef50_A4VDB0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 578
Score = 32.3 bits (70), Expect = 7.7
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 135 LKMSVEAFDPSSQSLTFLETEE--GDFIGADTQGSEFEFTDFTLPSQSQTQASQHDHGLS 308
LKM+ E S +++T + EE GD D + LPS+ + Q + + L+
Sbjct: 3 LKMNSEILFTSPKNVTQIFPEETIGDNDEKDMLKPKQNKKFLKLPSKKENQYFKSNKFLN 62
Query: 309 SSNQVNGIGRIELSSKISNVTNTIPELQFEEEDEALYSNKE 431
SS + L +IS TN++ E +F +++ ++ ++
Sbjct: 63 SSKDQKRLSGTILQDQISQQTNSVKEKKFVKQNTSIVPQEQ 103
>UniRef50_Q1E1X4 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 621
Score = 32.3 bits (70), Expect = 7.7
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +3
Query: 255 TLPSQSQTQASQHDHGLSSSNQVNGIGRIELSSKISNVTNTIPELQFEEEDEALYSNKEL 434
++PS S + + LSS + I ++K SN + + ++ A +S KE+
Sbjct: 494 SIPSDSIPRVKPQEELLSSKDLFGRIDERRTAAKSSNKSRQ--KKKYPCPYAAEHSCKEM 551
Query: 435 ---PDHACKYCGIHDPATVVMCNICNKWFCNGRGNTSGSH 545
P HA ++ H V C ICNK F R N H
Sbjct: 552 FSAPGHAARHSKTHTGEKNVRCPICNKAFAR-RDNMRQHH 590
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,306,542
Number of Sequences: 1657284
Number of extensions: 10677440
Number of successful extensions: 33913
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 32591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33868
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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