Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8j02
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 221 3e-58
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 93 2e-19
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 92 3e-19
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 92 3e-19
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 88 6e-18
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 88 6e-18
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 85 4e-17
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 83 2e-16
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 72 4e-13
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 72 4e-13
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 72 4e-13
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 64 1e-10
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 64 1e-10
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 37 0.015
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 33 0.14
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 30 1.3
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 29 2.3
U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm recept... 28 5.3
U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifyi... 28 7.0
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 221 bits (541), Expect = 3e-58
Identities = 101/203 (49%), Positives = 147/203 (72%), Gaps = 1/203 (0%)
Frame = +3
Query: 72 MALHVPKAPGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHI 251
MA+ +PK+ G + +K+GA+ F G +EAV RNI AC + A +RSAYGPNGMNKM+INHI
Sbjct: 1 MAMKIPKS-GYNRFMKEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHI 59
Query: 252 DKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXR 431
+K FVT+DA TI++EL+++HPAA+++++A++MQ+ ++GD TN V++L+
Sbjct: 60 EKLFVTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIH 119
Query: 432 LGVTTSEIADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFIS 611
+G+T E+A GYE+A +K LEILP+L+ E D KNI+EV + I +AI SKQY +E I+
Sbjct: 120 MGMTPQEVAAGYEQAAEKALEILPTLVVKEATDMKNIEEVRQYIRSAITSKQYDNEDIIA 179
Query: 612 ELVTKACVAILPEKT-TFNVDNV 677
+LV KACV P + FNVDN+
Sbjct: 180 DLVAKACVTTCPANSFNFNVDNI 202
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/138 (35%), Positives = 81/138 (58%)
Frame = +3
Query: 96 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 275
P + ++ + +G+E AV +I A + A ++R++ GP G++KM+++ +T+D
Sbjct: 16 PFIVMREQENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 276 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 455
TI+ ++DV+H AKLMV S+ QD E+GDGT V+VL+G G+ +I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 456 ADGYERALDKCLEILPSL 509
ADG++ A K LE L S+
Sbjct: 135 ADGFDLACKKALETLDSI 152
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/138 (35%), Positives = 81/138 (58%)
Frame = +3
Query: 96 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 275
P + ++ + +G+E AV +I A + A ++R++ GP G++KM+++ +T+D
Sbjct: 16 PFIVMREQENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 276 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 455
TI+ ++DV+H AKLMV S+ QD E+GDGT V+VL+G G+ +I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 456 ADGYERALDKCLEILPSL 509
ADG++ A K LE L S+
Sbjct: 135 ADGFDLACKKALETLDSI 152
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/138 (35%), Positives = 81/138 (58%)
Frame = +3
Query: 96 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 275
P + ++ + +G+E AV +I A + A ++R++ GP G++KM+++ +T+D
Sbjct: 16 PFIVMREQENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 276 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 455
TI+ ++DV+H AKLMV S+ QD E+GDGT V+VL+G G+ +I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 456 ADGYERALDKCLEILPSL 509
ADG++ A K LE L S+
Sbjct: 135 ADGFDLACKKALETLDSI 152
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 92.3 bits (219), Expect = 3e-19
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Frame = +3
Query: 162 RNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLAS 341
+N+ A A V+S+ GP G++KM+++ + VT+D TI+++L+VEHPA K++V +
Sbjct: 24 QNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELA 83
Query: 342 QMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNE 521
Q+QD EVGDGT V++++ + V + I +GY A + ++ + I +
Sbjct: 84 QLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENI-SF 142
Query: 522 IKDTKNIKEVTKGIVAAIMSKQYGHE-QFISELVTKACVAILPE---KTTFNVDNV 677
D+ + V ++ SK G + F ELV A A+ E K T+ ++ V
Sbjct: 143 TSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAV 198
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 92.3 bits (219), Expect = 3e-19
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Frame = +3
Query: 162 RNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLAS 341
+N+ A A V+S+ GP G++KM+++ + VT+D TI+++L+VEHPA K++V +
Sbjct: 24 QNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELA 83
Query: 342 QMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNE 521
Q+QD EVGDGT V++++ + V + I +GY A + ++ + I +
Sbjct: 84 QLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENI-SF 142
Query: 522 IKDTKNIKEVTKGIVAAIMSKQYGHE-QFISELVTKACVAILPE---KTTFNVDNV 677
D+ + V ++ SK G + F ELV A A+ E K T+ ++ V
Sbjct: 143 TSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAV 198
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 87.8 bits (208), Expect = 6e-18
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Frame = +3
Query: 111 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 290
+LKDG G + + NINAC+ A S+R+ GP G++K+I++ +++D TI+
Sbjct: 8 LLKDGTENKQGKGQII-SNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATIL 66
Query: 291 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 470
+ LD+ PAA MV ++ QDAEVGDGT V+VL+ GV +
Sbjct: 67 KLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIG 126
Query: 471 RALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQ-FISELVTKA 629
+A +K L+ L L +T+ + + K + SK E+ F + ++ A
Sbjct: 127 KACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA 180
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 87.8 bits (208), Expect = 6e-18
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Frame = +3
Query: 111 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 290
+LKDG G + + NINAC+ A S+R+ GP G++K+I++ +++D TI+
Sbjct: 8 LLKDGTENKQGKGQII-SNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATIL 66
Query: 291 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 470
+ LD+ PAA MV ++ QDAEVGDGT V+VL+ GV +
Sbjct: 67 KLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIG 126
Query: 471 RALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQ-FISELVTKA 629
+A +K L+ L L +T+ + + K + SK E+ F + ++ A
Sbjct: 127 KACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA 180
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 85.0 bits (201), Expect = 4e-17
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = +3
Query: 111 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 290
+L G + SG + + NINACK A +R++ GP M KM+++ + +T+D I+
Sbjct: 11 VLSQGTKRESGHQVQI-GNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAIL 69
Query: 291 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 470
RE+ V+HPAAK M+ ++ QD E GDGT VI+L+G + I Y
Sbjct: 70 REITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYR 129
Query: 471 RALDKCLEILPSLICN--EIKDTKNIKEVTKGIVAAIMSKQY 590
+AL+ ++ + +I D I +V K + M ++
Sbjct: 130 QALEDMIQWSENKFSKTVDITDDAEIAKVVKSCLGTKMISKW 171
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Frame = +3
Query: 165 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 344
NI A K A +VR++ GP GM+KMI + +T+D TI+ ++ V HP AK++V S+
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 345 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEI 524
QD E GDGT V+V++G G+ + I++ ++ A + +IL + +
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEM--SSP 153
Query: 525 KDTKNIKEVTKGIVAAIMSKQYG-HEQFISELVTKACVAILPEKTTFNVD 671
D N + K ++ SK H ++ + A I+ + NV+
Sbjct: 154 VDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVN 203
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Frame = +3
Query: 165 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 344
NI A K A +VR++ GP GM+KMI + +T+D TI+ ++ V HP AK++V S+
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 345 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEI 524
QD E GDGT V+V++G G+ + I++ ++ A + +IL + +
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEM--SSP 153
Query: 525 KDTKNIKEVTKGIVAAIMSKQYG-HEQFISELVTKACVAILPEKTTFNVD 671
D N + K ++ SK H ++ + A I+ + NV+
Sbjct: 154 VDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVN 203
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 71.7 bits (168), Expect = 4e-13
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Frame = +3
Query: 108 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQF----VTSD 275
Q+LKD A+ G E A + V+S GP GM+K++I+ + VT+D
Sbjct: 5 QILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 276 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 455
TI++ + V++PAAK++V S QD EVGDGT V VL+ + I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 456 ADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQY--GHEQFISELVTKA 629
GY RAL E SL + I+ NI++ I + + H++ ++L A
Sbjct: 124 ISGYRRALGIAQE---SLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQL---A 177
Query: 630 CVAILPEKTTFNVDNV 677
A+L K + N+D +
Sbjct: 178 VDAVLRLKGSGNLDAI 193
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 71.7 bits (168), Expect = 4e-13
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Frame = +3
Query: 108 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQF----VTSD 275
Q+LKD A+ G E A + V+S GP GM+K++I+ + VT+D
Sbjct: 5 QILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 276 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 455
TI++ + V++PAAK++V S QD EVGDGT V VL+ + I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 456 ADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQY--GHEQFISELVTKA 629
GY RAL E SL + I+ NI++ I + + H++ ++L A
Sbjct: 124 ISGYRRALGIAQE---SLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQL---A 177
Query: 630 CVAILPEKTTFNVDNV 677
A+L K + N+D +
Sbjct: 178 VDAVLRLKGSGNLDAI 193
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 71.7 bits (168), Expect = 4e-13
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Frame = +3
Query: 108 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQF----VTSD 275
Q+LKD A+ G E A + V+S GP GM+K++I+ + VT+D
Sbjct: 5 QILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 276 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 455
TI++ + V++PAAK++V S QD EVGDGT V VL+ + I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 456 ADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQY--GHEQFISELVTKA 629
GY RAL E SL + I+ NI++ I + + H++ ++L A
Sbjct: 124 ISGYRRALGIAQE---SLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQL---A 177
Query: 630 CVAILPEKTTFNVDNV 677
A+L K + N+D +
Sbjct: 178 VDAVLRLKGSGNLDAI 193
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/116 (29%), Positives = 56/116 (48%)
Frame = +3
Query: 153 AVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 332
A+ NI+ + +RS GP G KM+++ +T D ++ E+ ++HP A ++
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIA 78
Query: 333 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 500
AS QD GDGT ++L G G+ + +G+E A K LE+L
Sbjct: 79 KASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELL 134
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/116 (29%), Positives = 56/116 (48%)
Frame = +3
Query: 153 AVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 332
A+ NI+ + +RS GP G KM+++ +T D ++ E+ ++HP A ++
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIA 78
Query: 333 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 500
AS QD GDGT ++L G G+ + +G+E A K LE+L
Sbjct: 79 KASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELL 134
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 36.7 bits (81), Expect = 0.015
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = +3
Query: 189 AQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDV----EHPAAKLMVLASQMQDA 356
A +V GP G N +I +T D T+ + +D+ ++ AKL+ + +
Sbjct: 39 ADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANE 98
Query: 357 EVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALD 482
E GDGT VL+ R G EI G A++
Sbjct: 99 EAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVE 140
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 189 AQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDV----EHPAAKLMVLASQMQDA 356
A +V GP G N +I +T D T+ + +D+ ++ AKL+ + +
Sbjct: 39 ADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANE 98
Query: 357 EVGDGTNFVIVLS 395
E GDGT VL+
Sbjct: 99 EAGDGTTCATVLT 111
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 254 INMIDDHFVHAIRAICRTHTLCKL 183
IN ID H H RA+C +H L ++
Sbjct: 483 INHIDMHMAHVSRAVCHSHVLSQI 506
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 597 EQFISELVTKACVAILPEKTTFNVDNV 677
E + EL+ +AC +PE+T F +D V
Sbjct: 909 ESLVEELIEEACYGEIPEETLFALDEV 935
>U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm receptor
protein 138 protein.
Length = 328
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 314 WMFHI*LSYDGASITGNKLLINMIDDHFVHAIRAICRTHTLCKL 183
W FH+ Y GAS + +LI+++ F + IC+ LCKL
Sbjct: 83 WGFHLMCLY-GASYS---VLISLLATQFFYRYLVICKPEHLCKL 122
>U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 2 protein.
Length = 514
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 462 GYERALDKCLEILPSLICNEIKDTKNIKEV 551
GY++ LD+ I P IC+EI + + E+
Sbjct: 291 GYDQGLDRVFVIWPITICHEIDERSPLWEI 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,155,879
Number of Sequences: 27780
Number of extensions: 278063
Number of successful extensions: 819
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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