Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8i24
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.79 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.4  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -2

Query: 401 KLNILTQDQIQLRMQ-MLDLSRKIFLILPISGWVIILTFSKVYHRILYHTFVHLQ*EWQV 225
           K   LT   I+L  Q  +     +   L +S  V++  +SK +HR   H  + L    + 
Sbjct: 14  KFFALTPRSIKLEKQTFIQKFYAVAFFLALSIGVVVSIYSKSFHRNEIHIKIVLMFFKEA 73

Query: 224 HLWRFHY 204
            L+ F+Y
Sbjct: 74  SLYCFNY 80


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 161 LCGHKDKGLVLGVYYNENAKG 223
           +CG +  G   GVY  E  KG
Sbjct: 88  ICGDRASGKHYGVYSCEGCKG 108


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 335 IFLILPISGWVIILTFSKVYHRIL 264
           IF+ + +  WVIIL  +  + RI+
Sbjct: 98  IFIFVNVFFWVIILMSNYAFTRII 121


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 118 LCAIRNAAQNKGSETLWS 171
           +   RNA Q  G E  WS
Sbjct: 388 MVGFRNAVQGTGIENWWS 405


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 118 LCAIRNAAQNKGSETLWS 171
           +   RNA Q  G E  WS
Sbjct: 389 MVGFRNAVQGTGIENWWS 406


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 118 LCAIRNAAQNKGSETLWS 171
           +   RNA Q  G E  WS
Sbjct: 389 MVGFRNAVQETGIENWWS 406


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 293  LKLSPIPKLGESRIFFDLDP 352
            +++S   KLG++ +  DLDP
Sbjct: 1537 IQVSNNVKLGQNFVLLDLDP 1556


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,562
Number of Sequences: 336
Number of extensions: 3461
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)