Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8i15
         (390 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   3.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   5.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   5.2  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    22   6.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   9.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   9.1  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 107  VKRAQENAARAAKDETPLPEED 172
            V+  QEN  R  ++E  LP+ED
Sbjct: 2089 VRIQQENGHRITEEEYYLPDED 2110



 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 119  QENAARAAKDETPLPEEDV 175
            Q  A  A KDE PL  +DV
Sbjct: 968  QAVAGAAGKDEPPLQSDDV 986


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +2

Query: 8    LMERVDELNQEAIKFN---RYQQLVVRQQQDKHRWMVKR--AQENAARAAKDETPLPEED 172
            L +++D+L+    K     +  +  V++ +DK   M     A ++A R   DE    EE+
Sbjct: 905  LGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERTQLEEE 964

Query: 173  VNKL 184
             NKL
Sbjct: 965  ANKL 968



 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 14  ERVDELNQEAIKFNRYQQLVVRQQQD 91
           ERVD LN+E  + +   +L  R+ +D
Sbjct: 260 ERVDALNEERTEKHNRCKLAEREMKD 285


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 53   NRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPHPVPP 208
            NR  Q   +QQ+ +     +      ARAA +E   P  +V +     PVPP
Sbjct: 1057 NRSAQRRRQQQRQQRLGDFELVPAVLARAAANEAAEPTGEVEEEEVSPPVPP 1108


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 149 ETPLPEEDVNKLFKPHPVPPRLNPMIVAGQIDTYSQH 259
           + P P++ +      +  P R +P +VAG      QH
Sbjct: 63  QDPTPQQYIQTDQYQYAQPQRQHPSLVAGPQQQQQQH 99


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 80   QQQDKHRWMVKRAQENAARAAKDETP 157
            Q Q + +W V+   +NA R  +  TP
Sbjct: 1907 QMQLQQQWEVRYNYDNANRLIRKRTP 1932


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 236 QIDTYSQHISQFCSQSLAKLYLTQALQNAKEAKQ 337
           + D Y+  + Q CS+      L +   N KEAK+
Sbjct: 215 EADRYAS-LKQECSEKQVHFQLFKLYHNEKEAKR 247


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,996
Number of Sequences: 2352
Number of extensions: 6610
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)