Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8i15
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    26   0.13 
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   5.0  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    20   8.7  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    20   8.7  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    20   8.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 71  VVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPHPV 202
           VV+    KH+++ K+ ++        + PLP E  ++L K HP+
Sbjct: 106 VVKYLGGKHKFISKKIKKTMENKDITKRPLPNE--SQLIKRHPI 147


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 308 PESNTISLDSDYRTG 264
           PE+NT S+ + Y  G
Sbjct: 167 PENNTCSISNSYTNG 181


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 323 SRSEEPESNTISLDSDYR 270
           SRS E E N+   + +YR
Sbjct: 40  SRSREREQNSYKNEKEYR 57


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 323 SRSEEPESNTISLDSDYR 270
           SRS E E N+   + +YR
Sbjct: 40  SRSREREQNSYKNEKEYR 57


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 323 SRSEEPESNTISLDSDYR 270
           SRS E E N+   + +YR
Sbjct: 40  SRSREREQNSYKNEKEYR 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,228
Number of Sequences: 438
Number of extensions: 2096
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)