Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8i12
         (199 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DBF90D Cluster: UPI0000DBF90D related cluster; n...    31   6.5  
UniRef50_Q4Z2G0 Cluster: Putative uncharacterized protein; n=2; ...    30   8.6  
UniRef50_A0CQ74 Cluster: Chromosome undetermined scaffold_24, wh...    30   8.6  

>UniRef50_UPI0000DBF90D Cluster: UPI0000DBF90D related cluster; n=2;
           Euteleostomi|Rep: UPI0000DBF90D UniRef100 entry - Rattus
           norvegicus
          Length = 513

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +3

Query: 15  FNLDLYFYYYQTCHKYMECVF*YIYLQNILYVAGFKMYNIKHLTF 149
           + ++   YY +    Y E +  YIY+++ LY   + +Y ++HL +
Sbjct: 411 YYMEHLLYYTEHILYYTEHLLYYIYMEHFLYYMDYLLYCMEHLLY 455


>UniRef50_Q4Z2G0 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 274

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 9   KTFNLDLYFYYYQTCHKYMECVF 77
           K  N  +Y Y+Y  C KY++C+F
Sbjct: 42  KKINKYIYIYFYNFCIKYIKCLF 64


>UniRef50_A0CQ74 Cluster: Chromosome undetermined scaffold_24, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_24, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 3133

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 36   YYYQTCHKYMECV--F*YIYLQNILYVAGFKMYNIKHL 143
            YY +T H+  ECV  F Y  + + LY+  +K   IK+L
Sbjct: 1578 YYSKTLHQSFECVNNFAYSQMFHFLYIGFYKNITIKNL 1615


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,429,672
Number of Sequences: 1657284
Number of extensions: 2197796
Number of successful extensions: 4418
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4388
length of database: 575,637,011
effective HSP length: 45
effective length of database: 501,059,231
effective search space used: 10021184620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)