Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8i12
         (199 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.13 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   1.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    19   3.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    19   3.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   4.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    19   6.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.13
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +3

Query: 21  LDLYFYYYQ----TCHKYMECVF*YIYLQNILYVAGFKMYNIKHLTF 149
           L +Y++YY     T H  +     Y Y  ++L+   F ++ + HL F
Sbjct: 236 LCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTM-HLLF 281


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 1.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -3

Query: 140 MLNIVHFKSSYIKYIL*VYILK 75
           ++ +  F  S ++Y++ VY+LK
Sbjct: 273 VMYVFFFHLSDVRYVMVVYLLK 294


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 19.4 bits (38), Expect(2) = 3.0
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +2

Query: 59  IYGMCILIYILTEYTLC 109
           IYG    +++L+ +++C
Sbjct: 231 IYGFQNFLFVLSTFSIC 247



 Score = 18.2 bits (35), Expect(2) = 3.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 140 FNICIPAFY 166
           F+ICI  FY
Sbjct: 244 FSICITQFY 252


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 140 MLNIVHFKSSYIKYIL*VYILKYT 69
           + ++ +F + Y++ I  +YI  YT
Sbjct: 161 IFDVPNFVNEYVQAIEVLYICSYT 184


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.0 bits (37), Expect = 4.8
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 33  FYYYQTCHKYMECV 74
           F  ++ C KY  CV
Sbjct: 482 FMPHELCDKYYRCV 495


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
          protein.
          Length = 279

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 30 YFYYYQTCHKYMEC 71
          +F   + C KY EC
Sbjct: 45 FFADAEQCDKYYEC 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,814
Number of Sequences: 336
Number of extensions: 818
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2263821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)