Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8i12
         (199 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z81564-2|CAB04568.1|  189|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z83117-3|CAB05570.2|  356|Caenorhabditis elegans Hypothetical pr...    25   9.8  
AY008137-1|AAG32090.1|  356|Caenorhabditis elegans heterotrimeri...    25   9.8  

>Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical
           protein C06B3.2 protein.
          Length = 665

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -3

Query: 128 VHFKSS---YIKYIL*VYILKYTFHIFMTCL 45
           +HF S+   Y+ YIL   IL Y F  F +CL
Sbjct: 628 LHFVSTWQVYVYYILPATILTYIFAFFWSCL 658


>Z81564-2|CAB04568.1|  189|Caenorhabditis elegans Hypothetical
           protein K05C4.2 protein.
          Length = 189

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 81  YIYLQNILYVAGFKMYNIKHLTFAFQP 161
           YI+    L + GF MY + HL  A+ P
Sbjct: 159 YIFFAVALQIHGFSMYFMHHLAAAWAP 185


>Z83117-3|CAB05570.2|  356|Caenorhabditis elegans Hypothetical
           protein M04C7.1 protein.
          Length = 356

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 6   LKTFNLDLYFYYYQTCHKYMECV 74
           LKT ++++ F  YQ  + Y ECV
Sbjct: 280 LKTTSINVLFSTYQGSNDYAECV 302


>AY008137-1|AAG32090.1|  356|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 356

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 6   LKTFNLDLYFYYYQTCHKYMECV 74
           LKT ++++ F  YQ  + Y ECV
Sbjct: 280 LKTTSINVLFSTYQGSNDYAECV 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,753,137
Number of Sequences: 27780
Number of extensions: 59469
Number of successful extensions: 119
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 12,740,198
effective HSP length: 45
effective length of database: 11,490,098
effective search space used: 229801960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)