Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8i08
         (383 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   0.95 
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   2.2  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   2.2  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           22   6.7  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 244 RSAQSRYVGVPDADRGP 294
           R+ + R+VGVP +DR P
Sbjct: 573 RNGRGRFVGVPGSDRKP 589


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 39  HRGPHNILEKKID*KCCRNH 98
           H+G +N+L++  D  CC  H
Sbjct: 120 HQGMYNVLQEWYDFICCNIH 139


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 39  HRGPHNILEKKID*KCCRNH 98
           H+G +N+L++  D  CC  H
Sbjct: 120 HQGMYNVLQEWYDFICCNIH 139


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 289 RGPHPERRHTYFVRTVGTE 233
           R P  ERRH Y  R+ G +
Sbjct: 173 RAPRAERRHPYTRRSGGQQ 191


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,983
Number of Sequences: 2352
Number of extensions: 6264
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)