Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8h24
         (403 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9G8P4 Cluster: ABC transporter subunit; n=1; Naegleria...    31   6.4  
UniRef50_Q5CYG3 Cluster: Giant membrane protein; n=2; Cryptospor...    31   6.4  
UniRef50_A7LS06 Cluster: Putative uncharacterized protein; n=1; ...    31   8.5  
UniRef50_A0M6M1 Cluster: Putative uncharacterized protein; n=2; ...    31   8.5  
UniRef50_A2EZS0 Cluster: Putative uncharacterized protein; n=2; ...    31   8.5  
UniRef50_A0C576 Cluster: Chromosome undetermined scaffold_15, wh...    31   8.5  

>UniRef50_Q9G8P4 Cluster: ABC transporter subunit; n=1; Naegleria
           gruberi|Rep: ABC transporter subunit - Naegleria gruberi
          Length = 210

 Score = 31.5 bits (68), Expect = 6.4
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -1

Query: 388 YLPIVKVLFVYNIFLKLFWFLINCDIFAKTPY-II*HLHI 272
           YL  +KV F Y + +  F+F I+ D ++K  Y  I +LHI
Sbjct: 4   YLKFLKVYFFYLLLVLFFYFYISLDYYSKFIYNYILYLHI 43


>UniRef50_Q5CYG3 Cluster: Giant membrane protein; n=2;
           Cryptosporidium|Rep: Giant membrane protein -
           Cryptosporidium parvum Iowa II
          Length = 1789

 Score = 31.5 bits (68), Expect = 6.4
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -1

Query: 244 RHLRNFTGEPFKV*NLEKNVIKKKL 170
           + + +FTG PF + NL  N++KKK+
Sbjct: 629 QEITDFTGMPFSIINLSSNILKKKI 653


>UniRef50_A7LS06 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides ovatus ATCC 8483|Rep: Putative
           uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 1093

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +3

Query: 261 FHPSICRCQMIYGVFAKMSQLIKNQNSFKKMLYTNKTFTIGR 386
           FH ++ RC +  G   K S +++ + +  K +Y  K+ ++ R
Sbjct: 151 FHINLARCYIALGEMDKASAIVEEEIAISKKMYGEKSLSVAR 192


>UniRef50_A0M6M1 Cluster: Putative uncharacterized protein; n=2;
           Flavobacteriaceae|Rep: Putative uncharacterized protein
           - Gramella forsetii (strain KT0803)
          Length = 118

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 332 VFNQLRHFRKNSVYHLTSTYRRVKGDL 252
           V+ Q RHF K  +Y LTS +RR    +
Sbjct: 22  VYKQTRHFPKEEIYGLTSQFRRAASSI 48


>UniRef50_A2EZS0 Cluster: Putative uncharacterized protein; n=2;
            Eukaryota|Rep: Putative uncharacterized protein -
            Trichomonas vaginalis G3
          Length = 2084

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +3

Query: 228  KLRKCRLNQIAFHPSI---CRCQMIYGVFAKMSQLIKNQNSFKKMLYTNKTF 374
            KL+K    ++ F+ ++   C CQ    +   M+ L+K  + +K+M+Y N +F
Sbjct: 1032 KLKKNWFKRLVFNFTLWAKCDCQSFCFIVTTMTSLLKEDSLYKEMIYYNFSF 1083


>UniRef50_A0C576 Cluster: Chromosome undetermined scaffold_15, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_15,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1280

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 240 CRLNQIAFHPSICRCQMIYGVFAKMSQLIKNQNS 341
           C+ NQI  HP    C++IYG+++   Q++   NS
Sbjct: 506 CQTNQITSHP----CELIYGLYSFQEQILIQTNS 535


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,634,065
Number of Sequences: 1657284
Number of extensions: 4831187
Number of successful extensions: 9325
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9323
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)