Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8h12
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022385-1|AAY54801.1|  124|Drosophila melanogaster IP05263p pro...    28   6.3  
AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.      27   8.3  

>BT022385-1|AAY54801.1|  124|Drosophila melanogaster IP05263p
           protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 245 CYSGSSCGPLCNCHGWCCFILLSFFG 168
           C SGS CGP  +C   C   L S  G
Sbjct: 56  CKSGSCCGPCGSCSNGCAACLSSCCG 81


>AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.
          Length = 994

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 142 IATKARTPKKINSFIFKYFRDRLKNFTDHSSYL 44
           I T A + ++  +F   Y+R  +KNF+DHS +L
Sbjct: 298 IPTDADSARRFVAFC-NYYRRFIKNFSDHSRHL 329


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,055,521
Number of Sequences: 53049
Number of extensions: 231952
Number of successful extensions: 588
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)