Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8h11
         (568 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3YQV4 Cluster: Pentapeptide repeat domain protein; n=6...    34   2.7  
UniRef50_Q8I474 Cluster: Putative uncharacterized protein PFE013...    32   8.1  
UniRef50_A2DJN4 Cluster: Surface antigen BspA-like; n=3; Trichom...    32   8.1  

>UniRef50_Q3YQV4 Cluster: Pentapeptide repeat domain protein; n=6;
           canis group|Rep: Pentapeptide repeat domain protein -
           Ehrlichia canis (strain Jake)
          Length = 635

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 140 GLHLCTVIFNFERIKSSNLKNSQRKNVCMQTDNIETKSI 256
           GL L  V F+F  ++SS+ KNSQ KNV     N+E   +
Sbjct: 573 GLKLENVNFSFADLQSSHFKNSQLKNVDFSNANLENADL 611


>UniRef50_Q8I474 Cluster: Putative uncharacterized protein PFE0130c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE0130c - Plasmodium falciparum
           (isolate 3D7)
          Length = 1156

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
 Frame = +2

Query: 29  ILRNTFYNGTNRNACIFF--HLLAMKYSSCLNTITVIII----------GLHLCTVIFNF 172
           I ++  +N  N   C+ F  H   +KY  C+N  T  +           GL+L   + +F
Sbjct: 728 IYKDNIFNNNNNEKCLLFLFHKRILKYLKCINDYTTFLFPFNNSKACQEGLNLKKKMISF 787

Query: 173 -ERIKSSNLKNSQRK 214
            + IK  +LKN +R+
Sbjct: 788 IKHIKEKSLKNCKRE 802


>UniRef50_A2DJN4 Cluster: Surface antigen BspA-like; n=3;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 544

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = +2

Query: 101 YSSCLNTITVIIIGLHLCTVIFNFERIKSSNLKNSQRKNVCMQT--DNIETKSICVETCK 274
           +SSC N  T+I+ GL +    + +  I  SNLK+    N+  +T   +I  + I ++   
Sbjct: 391 FSSCTNLNTLILTGLEIVNSSYGYLFILCSNLKHIYFGNMPPKTFSSHISFEDIKIDVPS 450

Query: 275 YNCYEN 292
           Y+ ++N
Sbjct: 451 YDSWKN 456


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,076,976
Number of Sequences: 1657284
Number of extensions: 8112388
Number of successful extensions: 18805
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18777
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)