Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8h03
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    26   0.30 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    26   0.30 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    26   0.30 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    26   0.30 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 163  GIFYVLSIEYALLSLAQYLHFQGKMISWGFR 255
            GI Y+LSI    L L  Y      ++SWG R
Sbjct: 1032 GIIYLLSIPSMYLLLILYSIINLNVVSWGTR 1062


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 163  GIFYVLSIEYALLSLAQYLHFQGKMISWGFR 255
            GI Y+LSI    L L  Y      ++SWG R
Sbjct: 1032 GIIYLLSIPSMYLLLILYSIINLNVVSWGTR 1062


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 163  GIFYVLSIEYALLSLAQYLHFQGKMISWGFR 255
            GI Y+LSI    L L  Y      ++SWG R
Sbjct: 1032 GIIYLLSIPSMYLLLILYSIINLNVVSWGTR 1062


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 163  GIFYVLSIEYALLSLAQYLHFQGKMISWGFR 255
            GI Y+LSI    L L  Y      ++SWG R
Sbjct: 1032 GIIYLLSIPSMYLLLILYSIINLNVVSWGTR 1062


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 72  LISNYFVRYFINFD 31
           LI NY++ +FIN D
Sbjct: 299 LIPNYYIAHFINID 312


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 15/78 (19%), Positives = 32/78 (41%)
 Frame = +1

Query: 79  ILMKLKCHYNLLFNLITFTENDKYFI*IGIFYVLSIEYALLSLAQYLHFQGKMISWGFRL 258
           +L+ L C Y   +  I FT +    + I  FY + + +    +   +H    +  + F  
Sbjct: 231 VLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYC 290

Query: 259 HYLLKKQHYWLKRGYVNF 312
             ++    Y+  R ++ F
Sbjct: 291 ALIILLCIYYFCRAFIIF 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,019
Number of Sequences: 336
Number of extensions: 2566
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)