Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8h03
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020805-1|AAH20805.1| 310|Homo sapiens tRNA splicing endonucle... 42 0.002
BC004530-1|AAH04530.1| 310|Homo sapiens TSEN34 protein protein. 42 0.002
AK025929-1|BAB15284.1| 315|Homo sapiens protein ( Homo sapiens ... 42 0.002
D13633-1|BAA02797.2| 876|Homo sapiens KIAA0008 protein. 33 1.1
BT007344-1|AAP36008.1| 765|Homo sapiens discs, large homolog 7 ... 33 1.1
BC016276-1|AAH16276.2| 846|Homo sapiens discs, large homolog 7 ... 33 1.1
BC010658-1|AAH10658.2| 846|Homo sapiens discs, large homolog 7 ... 33 1.1
AB076695-1|BAB97376.1| 846|Homo sapiens hepatoma up-regulated p... 33 1.1
BC146835-1|AAI46836.1| 716|Homo sapiens Unknown (protein for MG... 32 1.4
AB046861-1|BAB13467.1| 718|Homo sapiens KIAA1641 protein protein. 32 1.4
M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein. 32 1.9
J05211-1|AAA35766.1| 1752|Homo sapiens protein ( Human desmoplak... 32 1.9
AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein. 32 1.9
BC043504-1|AAH43504.1| 822|Homo sapiens IQ motif containing wit... 31 2.5
BC028699-1|AAH28699.1| 679|Homo sapiens IQCA protein protein. 31 2.5
AY358688-1|AAQ89051.1| 121|Homo sapiens GALI1870 protein. 31 2.5
AK054711-1|BAB70798.1| 542|Homo sapiens protein ( Homo sapiens ... 31 2.5
AC093915-1|AAY24064.1| 383|Homo sapiens unknown protein. 31 2.5
AF273042-1|AAG34902.1| 685|Homo sapiens CTCL tumor antigen se1-... 31 3.3
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 31 4.4
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 31 4.4
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 31 4.4
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 31 4.4
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 31 4.4
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 31 4.4
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 31 4.4
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 31 4.4
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 31 4.4
U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated pr... 30 5.8
U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated pr... 30 5.8
DQ309037-1|ABD73921.1| 430|Homo sapiens golgin-like hypothetica... 30 5.8
BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein. 30 5.8
BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance ... 30 5.8
AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance ... 30 5.8
AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated p... 30 5.8
AB023230-1|BAA76857.1| 1062|Homo sapiens KIAA1013 protein protein. 30 5.8
AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein. 30 5.8
>BC020805-1|AAH20805.1| 310|Homo sapiens tRNA splicing endonuclease
34 homolog (S. cerevisiae) protein.
Length = 310
Score = 41.5 bits (93), Expect = 0.002
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +3
Query: 171 LRTQHRICSAFVGSVPSFPRQNDFLGLPIALSSEETALLVEKRICELHEMPAEFCKYE-- 344
LR + + VG++P PRQN LGLP+ L EE LL E L P ++
Sbjct: 22 LRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLLAEIGAVTLVSAPRPDSRHHSL 81
Query: 345 PTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNL 485
K EE ++ A A + R+ ++L +KI A KK+ L
Sbjct: 82 ALTSFKRQQEESFQEQSALAAEARETRR-QELLEKITEGQAAKKQKL 127
>BC004530-1|AAH04530.1| 310|Homo sapiens TSEN34 protein protein.
Length = 310
Score = 41.5 bits (93), Expect = 0.002
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +3
Query: 171 LRTQHRICSAFVGSVPSFPRQNDFLGLPIALSSEETALLVEKRICELHEMPAEFCKYE-- 344
LR + + VG++P PRQN LGLP+ L EE LL E L P ++
Sbjct: 22 LRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLLAEIGAVTLVSAPRPDSRHHSL 81
Query: 345 PTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNL 485
K EE ++ A A + R+ ++L +KI A KK+ L
Sbjct: 82 ALTSFKRQQEESFQEQSALAAEARETRR-QELLEKITEGQAAKKQKL 127
>AK025929-1|BAB15284.1| 315|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22276 fis, clone HRC03723. ).
Length = 315
Score = 41.5 bits (93), Expect = 0.002
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +3
Query: 171 LRTQHRICSAFVGSVPSFPRQNDFLGLPIALSSEETALLVEKRICELHEMPAEFCKYE-- 344
LR + + VG++P PRQN LGLP+ L EE LL E L P ++
Sbjct: 22 LRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLLAEIGAVTLISAPRPDSRHHSL 81
Query: 345 PTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNL 485
K EE ++ A A + R+ ++L +KI A KK+ L
Sbjct: 82 ALTSFKRQQEESFQEQSALAAEARETRR-QELLEKITEGQAAKKQKL 127
>D13633-1|BAA02797.2| 876|Homo sapiens KIAA0008 protein.
Length = 876
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 292 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 185
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 672 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 707
>BT007344-1|AAP36008.1| 765|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 765
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 292 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 185
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 561 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 596
>BC016276-1|AAH16276.2| 846|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 846
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 292 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 185
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 642 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 677
>BC010658-1|AAH10658.2| 846|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 846
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 292 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 185
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 642 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 677
>AB076695-1|BAB97376.1| 846|Homo sapiens hepatoma up-regulated
protein protein.
Length = 846
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 292 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTKAEHIR 185
S N AVS N +G P+++ N G + TK+EH++
Sbjct: 642 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 677
>BC146835-1|AAI46836.1| 716|Homo sapiens Unknown (protein for
MGC:167812) protein.
Length = 716
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +3
Query: 279 ALLVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKI 452
A +++KRI E E+ ++ K+E E +KEL L+ ++Q+ K+R +E+L QK+
Sbjct: 254 ASVLQKRISEKEEIKSQL-KHEILELEKELCS--LRFAIQQEKK--KRRNVEELHQKV 306
>AB046861-1|BAB13467.1| 718|Homo sapiens KIAA1641 protein protein.
Length = 718
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +3
Query: 279 ALLVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKI 452
A +++KRI E E+ ++ K+E E +KEL L+ ++Q+ K+R +E+L QK+
Sbjct: 256 ASVLQKRISEKEEIKSQL-KHEILELEKELCS--LRFAIQQEKK--KRRNVEELHQKV 308
>M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.
Length = 2871
Score = 31.9 bits (69), Expect = 1.9
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +3
Query: 285 LVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIV 464
L + R CE + + + E K+KE E L+ +L+++ + +KR+ E K+
Sbjct: 1142 LQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGT--RKREYENELAKVRNHY 1199
Query: 465 AGKKKNLINKGMSDANIDKDAMLEEEIKRIQD 560
+ NL NK ++ NI K + E +++ D
Sbjct: 1200 NEEMSNLRNKYETEINITKTTIKEISMQKEDD 1231
>J05211-1|AAA35766.1| 1752|Homo sapiens protein ( Human desmoplakin
mRNA, 3' end. ).
Length = 1752
Score = 31.9 bits (69), Expect = 1.9
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +3
Query: 285 LVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIV 464
L + R CE + + + E K+KE E L+ +L+++ + +KR+ E K+
Sbjct: 23 LQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGT--RKREYENELAKVRNHY 80
Query: 465 AGKKKNLINKGMSDANIDKDAMLEEEIKRIQD 560
+ NL NK ++ NI K + E +++ D
Sbjct: 81 NEEMSNLRNKYETEINITKTTIKEISMQKEDD 112
>AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.
Length = 2871
Score = 31.9 bits (69), Expect = 1.9
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +3
Query: 285 LVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIV 464
L + R CE + + + E K+KE E L+ +L+++ + +KR+ E K+
Sbjct: 1142 LQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGT--RKREYENELAKVRNHY 1199
Query: 465 AGKKKNLINKGMSDANIDKDAMLEEEIKRIQD 560
+ NL NK ++ NI K + E +++ D
Sbjct: 1200 NEEMSNLRNKYETEINITKTTIKEISMQKEDD 1231
>BC043504-1|AAH43504.1| 822|Homo sapiens IQ motif containing with
AAA domain protein.
Length = 822
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +3
Query: 351 EKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAM 530
EK KEL E +V E LK K+ ++ + AGKKK+ KG K
Sbjct: 427 EKRKELQSEIRIQVDELMRQELKNLKLAVDRERERPVKAGKKKD--KKG------KKGKK 478
Query: 531 LEEEIKRIQDLDPDHTLVQLPQEM 602
E++ K+ +DL D T+ L +E+
Sbjct: 479 KEKKAKKDKDLTADRTIESLYKEL 502
>BC028699-1|AAH28699.1| 679|Homo sapiens IQCA protein protein.
Length = 679
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +3
Query: 351 EKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAM 530
EK KEL E +V E LK K+ ++ + AGKKK+ KG K
Sbjct: 427 EKRKELQSEIRIQVDELMRQELKNLKLAVDRERERPVKAGKKKDK-KKG------KKGKK 479
Query: 531 LEEEIKRIQDLDPDHTLVQLPQEM 602
E++ K+ +DL D T+ L +E+
Sbjct: 480 KEKKAKKDKDLTADRTIESLYKEL 503
>AY358688-1|AAQ89051.1| 121|Homo sapiens GALI1870 protein.
Length = 121
Score = 31.5 bits (68), Expect = 2.5
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -1
Query: 604 YISCGSCTKVW-SGSKSCIL-FISSSNIAS-LSIFASDIPLFMRFFFFP 467
YISC +K+W SK C+L F+ + S LS+F+ I F FP
Sbjct: 65 YISCAKLSKIWFPASKPCLLAFLEVFLLMSRLSLFSKMICFLFLSFLFP 113
>AK054711-1|BAB70798.1| 542|Homo sapiens protein ( Homo sapiens
cDNA FLJ30149 fis, clone BRACE2000280, weakly similar to
MNN4 PROTEIN. ).
Length = 542
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +3
Query: 351 EKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAM 530
EK KEL E +V E LK K+ ++ + AGKKK+ KG K
Sbjct: 434 EKRKELQSEIRIQVDELMRQELKNLKLAVDRERERPVKAGKKKDK-KKG------KKGKK 486
Query: 531 LEEEIKRIQDLDPDHTLVQLPQEM 602
E++ K+ +DL D T+ L +E+
Sbjct: 487 KEKKAKKDKDLTADRTIESLYKEL 510
>AC093915-1|AAY24064.1| 383|Homo sapiens unknown protein.
Length = 383
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +3
Query: 351 EKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAM 530
EK KEL E +V E LK K+ ++ + AGKKK+ KG K
Sbjct: 187 EKRKELQSEIRIQVDELMRQELKNLKLAVDRERERPVKAGKKKD--KKG------KKGKK 238
Query: 531 LEEEIKRIQDLDPDHTLVQLPQEM 602
E++ K+ +DL D T+ L +E+
Sbjct: 239 KEKKAKKDKDLTADRTIESLYKEL 262
>AF273042-1|AAG34902.1| 685|Homo sapiens CTCL tumor antigen se1-1
protein.
Length = 685
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/63 (22%), Positives = 39/63 (61%)
Frame = +3
Query: 354 KDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAML 533
+DKE++ +K + E+ ++++K+K QLS+ +++ ++ K+ ++ + ++ M+
Sbjct: 423 EDKEVLSAEVKSLYEETINSVQKKK--QLSRDLEVFLSQKEDVILKEHITQLEKKLQLMV 480
Query: 534 EEE 542
EE+
Sbjct: 481 EEQ 483
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IDKDAMLEEEIKRIQDLDPDHTLVQL 590
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IDKDAMLEEEIKRIQDLDPDHTLVQL 590
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IDKDAMLEEEIKRIQDLDPDHTLVQL 590
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IDKDAMLEEEIKRIQDLDPDHTLVQL 590
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IDKDAMLEEEIKRIQDLDPDHTLVQL 590
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IDKDAMLEEEIKRIQDLDPDHTLVQL 590
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IDKDAMLEEEIKRIQDLDPDHTLVQL 590
+D+ + +E+KR+QDLD D TL QL
Sbjct: 159 LDRLDLARKELKRMQDLDEDATLTQL 184
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IDKDAMLEEEIKRIQDLDPDHTLVQL 590
+D+ + +E+KR+QDLD D TL QL
Sbjct: 158 LDRLDLARKELKRMQDLDEDATLTQL 183
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IDKDAMLEEEIKRIQDLDPDHTLVQL 590
+D+ + +E+KR+QDLD D TL QL
Sbjct: 96 LDRLDLARKELKRMQDLDEDATLTQL 121
>U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 30.3 bits (65), Expect = 5.8
Identities = 32/123 (26%), Positives = 59/123 (47%)
Frame = +3
Query: 258 ALSSEETALLVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQ 437
AL ++ AL + + E + E P EKDK L ++ LEQ+ AL+ K +
Sbjct: 1421 ALEQKDKALEPKDKDLEXKDKALEQKDKIPXEKDKALEQK--DTALEQKDKALEP-KDKD 1477
Query: 438 LSQKIDIIVAGKKKNLINKGMSDANIDKDAMLEEEIKRIQDLDPDHTLVQLPQEMYRNIE 617
L QK D ++ K+K +KD L+++++ ++ P+ T+ ++ R++E
Sbjct: 1478 LEQK-DRVLEQKEK---------IPEEKDKALDQKVRSVEHKAPEDTVAEMKD---RDLE 1524
Query: 618 MAD 626
D
Sbjct: 1525 QTD 1527
>U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 30.3 bits (65), Expect = 5.8
Identities = 32/123 (26%), Positives = 59/123 (47%)
Frame = +3
Query: 258 ALSSEETALLVEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQ 437
AL ++ AL + + E + E P EKDK L ++ LEQ+ AL+ K +
Sbjct: 1421 ALEQKDKALEPKDKDLEXKDKALEQKDKIPXEKDKALEQK--DTALEQKDKALEP-KDKD 1477
Query: 438 LSQKIDIIVAGKKKNLINKGMSDANIDKDAMLEEEIKRIQDLDPDHTLVQLPQEMYRNIE 617
L QK D ++ K+K +KD L+++++ ++ P+ T+ ++ R++E
Sbjct: 1478 LEQK-DRVLEQKEK---------IPEEKDKALDQKVRSVEHKAPEDTVAEMKD---RDLE 1524
Query: 618 MAD 626
D
Sbjct: 1525 QTD 1527
>DQ309037-1|ABD73921.1| 430|Homo sapiens golgin-like hypothetical
protein isoform I protein.
Length = 430
Score = 30.3 bits (65), Expect = 5.8
Identities = 24/109 (22%), Positives = 55/109 (50%)
Frame = +3
Query: 288 VEKRICELHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVA 467
+E+ + +L AE EP E+ + L+K LE+ A AL+ + + +Q+I
Sbjct: 75 LERSLSKLKHQMAEPLPPEPPAVPSEVELQHLRKELERVAGALQAQV--EYNQRI----- 127
Query: 468 GKKKNLINKGMSDANIDKDAMLEEEIKRIQDLDPDHTLVQLPQEMYRNI 614
+L+N+G + +++ L+E+ +R+++ + + PQ ++ +
Sbjct: 128 ----SLLNEGQKERLREQEERLQEQQERLREQEERLQQLAEPQNSFKEL 172
>BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein.
Length = 1621
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 577 VWSGSKSCILFISSSNIASLSIFASDIPLFMRFFFFPATMI 455
+WS + S + A SIF SDIP F PATMI
Sbjct: 1136 IWSFCFYVVTVFSVAGFA-FSIFESDIPFIFTFLIPPATMI 1175
>BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 30.3 bits (65), Expect = 5.8
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 360 KELMEEFLKKVLEQQASAL--KKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAML 533
KE ++++KK L+ A+ KKR+I + + ++ A K+KNL D ++++
Sbjct: 388 KEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKAR 447
Query: 534 EEEIKR 551
EE+ R
Sbjct: 448 VEELDR 453
>AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 30.3 bits (65), Expect = 5.8
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 360 KELMEEFLKKVLEQQASAL--KKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAML 533
KE ++++KK L+ A+ KKR+I + + ++ A K+KNL D ++++
Sbjct: 388 KEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKAR 447
Query: 534 EEEIKR 551
EE+ R
Sbjct: 448 VEELDR 453
>AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated
polypeptide protein.
Length = 1217
Score = 30.3 bits (65), Expect = 5.8
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 360 KELMEEFLKKVLEQQASAL--KKRKIEQLSQKIDIIVAGKKKNLINKGMSDANIDKDAML 533
KE ++++KK L+ A+ KKR+I + + ++ A K+KNL D ++++
Sbjct: 388 KEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKAR 447
Query: 534 EEEIKR 551
EE+ R
Sbjct: 448 VEELDR 453
>AB023230-1|BAA76857.1| 1062|Homo sapiens KIAA1013 protein protein.
Length = 1062
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 342 EPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDIIVAGKKKNLINKGMSDA-NID 518
E +K+K L E+ LKKV E + L++ ++ K + G+K + + + A +D
Sbjct: 457 ELKKKEKLLQEKLLKKVEELKKICLREAELTGKMPKEYPLNIGEKPPQVRRRVGTAFKLD 516
Query: 519 KDAMLEEEIKRIQDLDPDHTLVQ 587
+ + EE +Q+L+ + + Q
Sbjct: 517 DNLLPSEEDPALQELESNFLIQQ 539
>AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein.
Length = 1591
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 577 VWSGSKSCILFISSSNIASLSIFASDIPLFMRFFFFPATMI 455
+WS + S + A SIF SDIP F PATMI
Sbjct: 1106 IWSFCFYVVTVFSVAGFA-FSIFESDIPFIFTFLIPPATMI 1145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,071,550
Number of Sequences: 237096
Number of extensions: 1330588
Number of successful extensions: 4386
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 4217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4380
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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