Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8h02
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...   158   3e-39
AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical ...   120   9e-28
U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like pr...    31   0.89 
Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF045641-4|AAO91715.1|  332|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF039710-3|AAD32272.1|  347|Caenorhabditis elegans Serpentine re...    29   2.7  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AF039710-4|AAD32273.1|  347|Caenorhabditis elegans Serpentine re...    27   8.3  

>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score =  158 bits (383), Expect = 3e-39
 Identities = 63/109 (57%), Positives = 91/109 (83%)
 Frame = +3

Query: 252 VNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIK 431
           VNVY+T  +++NLSRH+ML WVNDCLQ++F KIE+L TGA YC F D LFP S+ +K++K
Sbjct: 6   VNVYTTASSADNLSRHEMLMWVNDCLQAHFTKIEQLHTGAGYCLFTDFLFPDSIQLKKVK 65

Query: 432 FKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWF 578
           + + LE +++ N+K++Q  +K +GV+K++P+DKL+KG+FQDNFEFLQWF
Sbjct: 66  WNSRLELDWLSNWKLVQTTWKNLGVEKVIPVDKLIKGKFQDNFEFLQWF 114


>AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical
           protein VW02B12L.3 protein.
          Length = 299

 Score =  120 bits (289), Expect = 9e-28
 Identities = 51/111 (45%), Positives = 80/111 (72%)
 Frame = +3

Query: 246 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 425
           M VNV+ + VT++ LSR + +AWVN+ L+S+F K+EE+ +GAAYCQ   +LF  ++ +K+
Sbjct: 1   MVVNVFISAVTTDTLSRKEAVAWVNNLLKSHFTKVEEMASGAAYCQLTHLLF-NAINLKK 59

Query: 426 IKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWF 578
           +KF    E + + N+K+L   +K +G+DK V ++K+ K +FQDN EFLQWF
Sbjct: 60  VKFNPRSEPDVLNNWKVLTTTWKDLGIDKPVDVEKMKKAKFQDNMEFLQWF 110


>U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like
           protein family protein20 protein.
          Length = 217

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 620 VICRTSIVGVKEFLEPLQKLKIILETTLHQFVN 522
           +IC      V  FL P++K+++I +T L  FVN
Sbjct: 136 IICTNCQSAVNAFLAPIKKVELITKTELTDFVN 168


>Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical
           protein W07G1.2 protein.
          Length = 363

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = -1

Query: 602 IVGVKEFLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDS 423
           ++G   +   L    ++ +  L  F +  YL+   +F   + YF +   +   ICLK   
Sbjct: 4   LIGNSSYFRVLTPTTVLHDHRLRGFPDNIYLIVYGIFHLLIMYFVLKCAY---ICLKIRV 60

Query: 422 FHW 414
           FHW
Sbjct: 61  FHW 63


>Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical
           protein T09E11.10 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = +3

Query: 387 MDMLFPGSVPMKR-IKFKTNL---EHEYIQNFKILQAGFKK 497
           M M+F G  P K  I F +++   +HEY++ ++I  A FK+
Sbjct: 288 MTMMFMGYEPTKEPILFSSHIPLKDHEYLEQYRIQMADFKE 328


>AF045641-4|AAO91715.1|  332|Caenorhabditis elegans Hypothetical
           protein F53H1.4b protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +3

Query: 246 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 425
           +A+ VYS  V + NLS  D+L  + D +   F   E+L +       +     G + +  
Sbjct: 17  LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 75

Query: 426 IKFKTNLEHEYIQNFKILQA-GFKKMGVDKIVPIDK 530
           ++  T + H  ++  K L     KK+ ++    +D+
Sbjct: 76  MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVDE 111


>AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical
           protein F53H1.4c protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +3

Query: 246 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 425
           +A+ VYS  V + NLS  D+L  + D +   F   E+L +       +     G + +  
Sbjct: 53  LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 111

Query: 426 IKFKTNLEHEYIQNFKILQA-GFKKMGVDKIVPIDK 530
           ++  T + H  ++  K L     KK+ ++    +D+
Sbjct: 112 MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVDE 147


>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
           protein F53H1.4a protein.
          Length = 1370

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +3

Query: 246 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 425
           +A+ VYS  V + NLS  D+L  + D +   F   E+L +       +     G + +  
Sbjct: 53  LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 111

Query: 426 IKFKTNLEHEYIQNFKILQA-GFKKMGVDKIVPIDK 530
           ++  T + H  ++  K L     KK+ ++    +D+
Sbjct: 112 MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVDE 147


>AF039710-3|AAD32272.1|  347|Caenorhabditis elegans Serpentine
           receptor, class h protein100 protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = +3

Query: 255 NVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKF 434
           N YSTN +  NLS   + +W      ++F +I  L        F  +L    V MK +K+
Sbjct: 7   NYYSTNYSKCNLSESFLASWKGVAYPTDFIQIFSL--PLQILAFYIILTKTPVQMKSMKW 64

Query: 435 KTNLEHEYIQNFKILQAGF 491
                H +   F ++   F
Sbjct: 65  PLFYNHLFCSIFDVILCTF 83


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 584 FLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLY 459
           F+E L+ LK +L++ LH   N Y+L H  +   S   F +LY
Sbjct: 21  FVE-LRSLKNLLKSILHNIENDYFLAHQKVRLYSSHNFVMLY 61


>AF039710-4|AAD32273.1|  347|Caenorhabditis elegans Serpentine
           receptor, class h protein99 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 20/79 (25%), Positives = 32/79 (40%)
 Frame = +3

Query: 255 NVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKF 434
           N YSTN +  NLS   + +W      ++  +I  L        F  +L    V MK +K+
Sbjct: 7   NYYSTNYSKCNLSESFLASWKGVAYPTDIIQIFSL--PLQILAFFIILAKSPVQMKSMKW 64

Query: 435 KTNLEHEYIQNFKILQAGF 491
                H +   F ++   F
Sbjct: 65  PLFYNHLFCSIFDLILCTF 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,309,687
Number of Sequences: 27780
Number of extensions: 312579
Number of successful extensions: 811
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)