Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8h01
(641 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 3.7
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 22 3.7
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 22 3.7
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 4.9
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.5
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.5
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.5
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.5
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.5
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 21 6.5
AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory recept... 21 8.6
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 556 NIPSTQRNRRHYAEARSYDPYPVDG 630
+IP+ Q+ HY+ DPY G
Sbjct: 28 DIPNAQQMPPHYSNYHYEDPYGYTG 52
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 556 NIPSTQRNRRHYAEARSYDPYPVDG 630
+IP+ Q+ HY+ DPY G
Sbjct: 28 DIPNAQQMPPHYSNYHYEDPYGYTG 52
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 556 NIPSTQRNRRHYAEARSYDPYPVDG 630
+IP+ Q+ HY+ DPY G
Sbjct: 28 DIPNAQQMPPHYSNYHYEDPYGYTG 52
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/33 (24%), Positives = 21/33 (63%)
Frame = -2
Query: 367 FADTDYIHSSRCFDSETNCKYMA*YIFKKFEFV 269
F+ +Y++SS+C ++ T ++ + K+F ++
Sbjct: 161 FSMLNYVYSSKCENNSTGVEH---FFKKQFHYI 190
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 366 LLIQTISIQVDALTLKRIVSTWLNIFSRNSNLSW 265
L +Q I I VD I + WL++ + NL W
Sbjct: 35 LTLQQI-IDVDEKNQLLITNIWLSLEWNDYNLKW 67
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 366 LLIQTISIQVDALTLKRIVSTWLNIFSRNSNLSW 265
L +Q I I VD I + WL++ + NL W
Sbjct: 35 LTLQQI-IDVDEKNQLLITNIWLSLEWNDYNLKW 67
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 366 LLIQTISIQVDALTLKRIVSTWLNIFSRNSNLSW 265
L +Q I I VD + WLN+ + NL W
Sbjct: 35 LTLQQI-IDVDEKNQILTTNAWLNLEWNDYNLKW 67
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 366 LLIQTISIQVDALTLKRIVSTWLNIFSRNSNLSW 265
L +Q I I VD + WLN+ + NL W
Sbjct: 35 LTLQQI-IDVDEKNQILTTNAWLNLEWNDYNLKW 67
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 366 LLIQTISIQVDALTLKRIVSTWLNIFSRNSNLSW 265
L +Q I I VD + WLN+ + NL W
Sbjct: 35 LTLQQI-IDVDEKNQILTTNAWLNLEWNDYNLKW 67
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 305 HGLIYFQEIRIC 270
HGL+Y E+ IC
Sbjct: 477 HGLVYDLELNIC 488
>AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory receptor
candidate 58 protein.
Length = 376
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 MVSITLNYLLEKKWTDTKYVFTYV 217
+VSI L L K+W F Y+
Sbjct: 92 LVSIILGSLKTKEWAKLNNKFQYI 115
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,719
Number of Sequences: 336
Number of extensions: 3386
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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