Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8h01
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z81481-5|CAB63436.1|  405|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein
            F52G2.2a protein.
          Length = 1319

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 526  DLYDASELDRNIPSTQRNRRHYAE 597
            DL D  +L+RNI + QR +RHY E
Sbjct: 1294 DLLD--DLERNIDACQREKRHYYE 1315


>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical protein
            F52G2.2b protein.
          Length = 1129

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 526  DLYDASELDRNIPSTQRNRRHYAE 597
            DL D  +L+RNI + QR +RHY E
Sbjct: 1104 DLLD--DLERNIDACQREKRHYYE 1125


>Z81481-5|CAB63436.1|  405|Caenorhabditis elegans Hypothetical
           protein C38D9.7 protein.
          Length = 405

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 25/120 (20%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
 Frame = +1

Query: 151 LNYSQLFVGEKMDRYKICFHLRKRHF*LLTNSMNIIYQPRQIRIS*KYIKPCTYNSFQS- 327
           L+++ L +  + D  ++  + +  ++  + N   IIY+ R IRI     +      F++ 
Sbjct: 153 LHFNTLGICFEQDEARLFLNEKTVNYCPVPNGCTIIYENRTIRIKGGDYRKIALQDFKTI 212

Query: 328 QSIDLNGYS-LYQQMRSAPIDMYVTRMRVRLPQNSNWVRVEKCYFDPRNVSLDTMLLFHD 504
            S D   +S L+    S  I   + +  + + ++ N +RV K   + +N  +D +L + +
Sbjct: 213 VSKDAKTFSVLFDAQMSEQIRGNIFKDVLDVLRSMNKLRVRKLVCELKNEEIDAILPYFE 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,842,723
Number of Sequences: 27780
Number of extensions: 315472
Number of successful extensions: 662
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)