Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8h01
         (641 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    27   0.15 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    27   0.15 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.82 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   5.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 12/53 (22%), Positives = 30/53 (56%)
 Frame = +2

Query: 29  ASDSVLKLL*KSMSADIHSNN*LLLAAVMHRLNRSFRSFMVSITLNYLLEKKW 187
           ASD++ ++L  + + ++H+++   + + + RLN  F S  +  +  + L+  W
Sbjct: 454 ASDALKQILSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTLDVAW 506


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 12/53 (22%), Positives = 30/53 (56%)
 Frame = +2

Query: 29  ASDSVLKLL*KSMSADIHSNN*LLLAAVMHRLNRSFRSFMVSITLNYLLEKKW 187
           ASD++ ++L  + + ++H+++   + + + RLN  F S  +  +  + L+  W
Sbjct: 492 ASDALKQILSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTLDVAW 544


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -3

Query: 321 KRIVSTWLNIFSRNSNLSWLVNNIHRIREQSKMP 220
           K I+  W+    +N+  +W++ N  R+R  ++ P
Sbjct: 337 KVIIDNWIKGTPQNNVPNWVMGNHDRVRVGTRYP 370


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 297 NIFSRNSNLSWLVN 256
           N F  N+NL WLVN
Sbjct: 275 NAFRGNNNLKWLVN 288


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/45 (20%), Positives = 22/45 (48%)
 Frame = -3

Query: 360 IQTISIQVDALTLKRIVSTWLNIFSRNSNLSWLVNNIHRIREQSK 226
           I+ +S   ++   K++V  W+     +   +W+  N  ++R  S+
Sbjct: 311 IKNVSRDSNSSDFKKLVDNWMTYMPPSGIPNWVPGNHDQLRLVSR 355


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 345 IQVDALTLKRIVSTWLNIFSRNSNLSWLVNNIHRIRE 235
           I VD      I + WL +   + N+ W V++   +R+
Sbjct: 61  IDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/45 (17%), Positives = 22/45 (48%)
 Frame = -3

Query: 360 IQTISIQVDALTLKRIVSTWLNIFSRNSNLSWLVNNIHRIREQSK 226
           I+ +S   ++   K+++  W+     +   +W+  N  ++R  S+
Sbjct: 311 IKNVSRDSNSSDFKKLIDNWMTYMPPSGIPNWVPGNHDQLRLVSR 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,958
Number of Sequences: 438
Number of extensions: 3850
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)