Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8g23
(478 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 100 1e-21
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 97 9e-21
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 95 2e-20
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 91 4e-19
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 87 7e-18
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 87 7e-18
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 84 6e-17
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 62 2e-10
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 60 7e-10
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 58 5e-09
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 56 1e-08
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 39 0.002
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 33 0.16
01_05_0027 - 17331888-17331968,17332236-17332806,17333190-173333... 33 0.16
02_01_0555 + 4086434-4087157,4087257-4087943,4088495-4089162 30 0.84
11_08_0091 - 28303446-28303732,28303825-28304297,28304383-283045... 29 1.5
05_01_0147 - 981697-983739 29 1.9
11_03_0215 + 11809068-11809300,11809872-11809964,11810976-118111... 29 2.6
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 29 2.6
06_03_0933 + 26067109-26067232,26067334-26067486,26068929-260692... 28 3.4
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 28 3.4
07_03_0382 + 17470508-17470807,17471449-17474517 28 4.5
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730... 27 5.9
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 27 7.8
08_02_1359 + 26382605-26382815,26382907-26382998,26383722-263837... 27 7.8
08_02_0269 + 15087481-15087893,15087978-15088074,15089068-150891... 27 7.8
07_03_1528 + 27474973-27475289,27476890-27477073,27477081-274772... 27 7.8
03_02_1029 - 13488535-13493037 27 7.8
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/86 (53%), Positives = 65/86 (75%)
Frame = +3
Query: 219 KKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 398
K ++V+VLGGPGSGKGTQC IV +GFTHLS GDLLRAE+KSGSE + +++ G++
Sbjct: 23 KVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKI 82
Query: 399 VPNEIVLDLLKEAILARAEESKGFLI 476
VP+E+ + LL++A++ E+ FLI
Sbjct: 83 VPSEVTIKLLQDAMI--KNENDKFLI 106
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 96.7 bits (230), Expect = 9e-21
Identities = 43/75 (57%), Positives = 56/75 (74%)
Frame = +3
Query: 219 KKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 398
K I++VLGGPGSGKGTQC IV +GF HLS G+LLRAE+ SGSE + I+ G++
Sbjct: 22 KVKIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEINSGSENGTMIDTIITEGKI 81
Query: 399 VPNEIVLDLLKEAIL 443
VP+EI + LL+EAI+
Sbjct: 82 VPSEITIKLLQEAII 96
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +3
Query: 231 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNE 410
V + G P SGKGTQC+ I +KYG H+S GDLLRAE+ +GSE K ME+G+LVP+E
Sbjct: 76 VMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDE 135
Query: 411 IVLDLLKEAILARAEESKGFLI 476
IV++++KE +L + KG+L+
Sbjct: 136 IVVNMVKERLLQPDAQEKGWLL 157
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 91.1 bits (216), Expect = 4e-19
Identities = 40/87 (45%), Positives = 65/87 (74%)
Frame = +3
Query: 216 SKKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGE 395
+K I +VLGGPGSGKGTQC +I + +GF HLS GDLLR+E+ +G E+ + + I++ G+
Sbjct: 40 TKPFIAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGELILNIIKEGK 99
Query: 396 LVPNEIVLDLLKEAILARAEESKGFLI 476
+VP+EI ++L+++A+ + ++K LI
Sbjct: 100 IVPSEITVELIRKAM--ESSDAKRVLI 124
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 87.0 bits (206), Expect = 7e-18
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +3
Query: 204 PIDTSKKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIM 383
P K +IV+V+GGPGSGKGTQC KIV ++GFTHLS GDLLR E K +E+ + +M
Sbjct: 69 PPPGKKITIVFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLM 128
Query: 384 ERGELVPNEIVLDLLKEAI 440
G+LV +++++ LL +A+
Sbjct: 129 NEGKLVSSDLIVKLLFKAM 147
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 87.0 bits (206), Expect = 7e-18
Identities = 38/64 (59%), Positives = 50/64 (78%)
Frame = +3
Query: 219 KKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 398
K ++V+VLGGPGSGKGTQC IV +GF HLS GDLLRAE+KSGSE + +++ G++
Sbjct: 26 KVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKI 85
Query: 399 VPNE 410
VP+E
Sbjct: 86 VPSE 89
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 83.8 bits (198), Expect = 6e-17
Identities = 44/104 (42%), Positives = 61/104 (58%)
Frame = +3
Query: 165 LMCKSPKCKAYMAPIDTSKKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVK 344
L C++ + A A + K V + G P SGKGTQC IV KYG H+STGDLLRAEV
Sbjct: 72 LRCRASEGAAAAARKEAPLK--VMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVS 129
Query: 345 SGSERAKCLTAIMERGELVPNEIVLDLLKEAILARAEESKGFLI 476
SG+E K M+ G LVP+++V D++ + +G+L+
Sbjct: 130 SGTEIGKKAKEYMDNGMLVPDQVVTDMVVSRLSQPDVRERGWLL 173
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +3
Query: 219 KKSIVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGE 395
++++ WV LG PG GKGT ++ G H++TGDL+R E+ S + L I+ +G+
Sbjct: 58 ERNVQWVFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPLSVQLAEIVNQGK 117
Query: 396 LVPNEIVLDLLKEAILARAEESK-GFLI 476
LV +EI+++LL + + E+ + GF++
Sbjct: 118 LVSDEIIINLLSKRLKKGEEQGESGFIL 145
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 60.5 bits (140), Expect = 7e-10
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = +3
Query: 237 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 416
++G PGSGKGTQ I +Y HL+TGD+LRA V + + M++GELV +++V
Sbjct: 35 LVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLV 94
Query: 417 LDLLKEAILARAEESKGFLI 476
+ ++ EA + + KGF++
Sbjct: 95 VGIIDEA-MKKPSCQKGFIL 113
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 57.6 bits (133), Expect = 5e-09
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +3
Query: 231 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNE 410
V ++G PG GKGTQ I ++ HL+TGD+LRA V + + M++GELV ++
Sbjct: 31 VILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDD 90
Query: 411 IVLDLLKEAILARAEESKGFLI 476
+V+ ++ EA + + KGF++
Sbjct: 91 LVVGIIDEA-MKKTSCQKGFIL 111
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 56.4 bits (130), Expect = 1e-08
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +3
Query: 222 KSIVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 398
+ + WV LG PG GKGT ++ H++TGDL+R + S ++ L I+ G+L
Sbjct: 52 RRVQWVFLGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPGPFSEQLAEIVNNGKL 111
Query: 399 VPNEIVLDLLKEAILARAEESK-GFLI 476
V +EI+++LL + + AE+ + GF++
Sbjct: 112 VSDEIIINLLSKRLEEGAEKGELGFIL 138
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 192 AYMAPIDTSKKSIVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKC 368
A M P WV +G PG K ++ ++S G L+R E+ S K
Sbjct: 59 AEMCPTGGGGGGPQWVVMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKK 118
Query: 369 LTAIMERGELVPNEIVLDLLKEAI 440
+ + G+LVP +I+ LL + +
Sbjct: 119 IANSVNEGKLVPEDIIFGLLTKRL 142
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 231 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLR 332
V V G PG+GK T C + H++ GDL+R
Sbjct: 15 VLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVR 48
>01_05_0027 -
17331888-17331968,17332236-17332806,17333190-17333335,
17333412-17333459
Length = 281
Score = 32.7 bits (71), Expect = 0.16
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 164 SDVQITEMQSVHGT--HRYIEKVNRVGPGRSRIRKGNTMRQDRRQIRVHSPLDWRPAQG* 337
S V + +HG HR + +++ PGRSR+ + MR+ ++ RV S RP+
Sbjct: 161 SPVSFSSASLLHGLLLHRVLSRLHTTDPGRSRLAR---MRKSWKKFRVGSARCCRPSMSR 217
Query: 338 SQKRLGEG 361
K G G
Sbjct: 218 PSKLPGSG 225
>02_01_0555 + 4086434-4087157,4087257-4087943,4088495-4089162
Length = 692
Score = 30.3 bits (65), Expect = 0.84
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 72 K*TNTFLYYAMEKKLCEPCKEPIVDKLPPCPLMC--KSPKCKAYMAPIDTSKKSIVWVLG 245
K +N L ME L + P+V +M K+P+C A A SKKS VW LG
Sbjct: 511 KSSNVLLDGDMEAVLSDYALVPVVTASAAAQVMVAYKAPECVAAAAAGKPSKKSDVWSLG 570
>11_08_0091 -
28303446-28303732,28303825-28304297,28304383-28304574,
28304688-28304986,28305086-28305121
Length = 428
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 228 IVWVLGGPGSGKGTQCDKIVAKYGFT--HLSTGDL 326
I+ + GG G GK QC+ + AK G +S G+L
Sbjct: 151 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 185
>05_01_0147 - 981697-983739
Length = 680
Score = 29.1 bits (62), Expect = 1.9
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 150 LPPCPLMCKSPKCKAYMAPIDTSKKS--IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGD 323
LPP P +P KA + I + ++ V+G GSGK T D + + L
Sbjct: 44 LPPLPT--DAPPAKALLDGISGEARDGEVLAVMGASGSGKSTLLDALAGRIARGSLRGRV 101
Query: 324 LLRAEVKSGSERAKCLTA-IMERGELVPNEIVLDLL 428
L E G R + ++A +M+ L P V + L
Sbjct: 102 ELNGEALHG-RRVRAISAYVMQDDVLYPMLTVRETL 136
>11_03_0215 +
11809068-11809300,11809872-11809964,11810976-11811193,
11812780-11812832,11813411-11813527,11814817-11814908,
11815672-11815758,11816625-11816742
Length = 336
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 228 IVWVLGGPGSGKGTQCDKIVAKYGFT 305
+V V+G GSGK TQ +I+ + G+T
Sbjct: 33 VVVVIGETGSGKSTQLSQILHRRGYT 58
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 28.7 bits (61), Expect = 2.6
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = +3
Query: 126 CKEPIVDKLPPCPLMCKSPK--CKAYMAPIDTSKKS-IVWVLGGPGSGKGTQCDKIVAKY 296
C +L C MC + K K T + S + +LG PGSGK T + K
Sbjct: 76 CAINAAQELAACAHMCTTRKKPMKIINEATGTIRPSRMTLLLGAPGSGKTTLLKALAGKL 135
Query: 297 GFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIVLDLLKEAI 440
+ G + + S + L A + + +L E+ L LK+ I
Sbjct: 136 DSSLKMKGKVTYNGEEVNSSTPQYLHAYVSQYDLHHAEMTLSSLKKLI 183
>06_03_0933 +
26067109-26067232,26067334-26067486,26068929-26069279,
26069375-26069451,26069665-26070982,26071948-26072009,
26072253-26072309
Length = 713
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -3
Query: 383 HNSGKAFRPLRAAFDFSPEQVSSREVS---EPVFGDDL 279
HN G +FRP +A + Q+SS S EP+FGD+L
Sbjct: 532 HNDGTSFRPSQANI-ANINQLSSFAASSGQEPMFGDEL 568
>03_05_0398 +
23790257-23790323,23791116-23791339,23792208-23792275,
23794738-23794980,23795108-23795237,23797235-23797954
Length = 483
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 174 KSPKCKAYMAPIDTSKKSIVWVL--GGPGSGKGTQCDKIV 287
+ P C MAP+ ++S V +L GG G+GK T +I+
Sbjct: 160 EEPHCTDVMAPVAHDERSPVLLLMGGGMGAGKSTVLKEIL 199
>07_03_0382 + 17470508-17470807,17471449-17474517
Length = 1122
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/87 (28%), Positives = 41/87 (47%)
Frame = +3
Query: 216 SKKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGE 395
S K++V ++GG G+GK T KI + T + G ++ V + + L+AI+
Sbjct: 186 SAKTLVAIVGGSGTGKTTLAWKIHDDHR-TRNAFGMIVWVSVFNDFDDIGLLSAIVTAAG 244
Query: 396 LVPNEIVLDLLKEAILARAEESKGFLI 476
P E E +LA + K FL+
Sbjct: 245 GNPKEAKNRTQLELMLASMLKGKRFLL 271
>12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,
7302885-7304042,7304133-7304291,7304397-7304504,
7305045-7305304,7305936-7306101,7307025-7307050,
7307318-7307402,7307486-7307695,7308815-7308872,
7308964-7309037,7309323-7309373,7309576-7309664,
7310027-7310104,7310164-7310269
Length = 1140
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 212 YIEKVNRVGPGRSRIRKGNTMRQDRRQIRVHSPL-DWR 322
++EK P + R+ GN M +++ Q ++H + +WR
Sbjct: 924 FVEKEKYELPSKCRLHPGNDMFREQEQHKIHFDINEWR 961
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 16 LTFYLKTSNFISNMNKE*KNKQIHFCIMQWKRN 114
LT+ K + + + +NK I FC +QW +
Sbjct: 508 LTYVEKPTRILETSKRRTRNKVIRFCKVQWSHH 540
>08_02_1359 +
26382605-26382815,26382907-26382998,26383722-26383791,
26383895-26384013,26384580-26384676,26384781-26384860,
26384986-26385180,26385460-26385520,26386408-26386468,
26386900-26386993,26387085-26387157,26387158-26387270,
26387444-26387587
Length = 469
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 180 PKCKAYMAPIDTSKKSIVWVLGGPGSGKGTQCDKIV 287
P A A + + ++ V GG SGK T CD I+
Sbjct: 53 PPSAAAAAEEGSKQPFVIGVSGGTASGKTTVCDMII 88
>08_02_0269 + 15087481-15087893,15087978-15088074,15089068-15089112,
15089281-15089492,15090809-15090911,15091002-15091097,
15091405-15091473,15093341-15093588,15093640-15093759,
15093847-15094284,15094503-15094620,15095262-15095303,
15097099-15097161,15097365-15097475,15097730-15097801,
15097875-15097993,15099682-15099745,15100238-15101860
Length = 1350
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 203 THRYI---EKVNRVGPGRSRIRKGNTMRQDRRQIRVHSP 310
T RY+ E+ N PG++ ++ G MR+ R + +H P
Sbjct: 1311 TDRYVPDLEQTNHQIPGQASLQDGYFMRRSRSFVNMHVP 1349
>07_03_1528 +
27474973-27475289,27476890-27477073,27477081-27477261,
27477270-27478206,27478384-27479035,27479352-27479798
Length = 905
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 229 IDFFDVSMGAMYALHFGDLHIRGHGGSLSTIGSLHGSHSFFSIA*YKNVFVYFFILYSYL 50
++ + + A L FG+LHI +S G H++F + KN I YS +
Sbjct: 277 LEMIVIDICAAIILSFGNLHIPAALVRVSLAGYRLAEHNYFGVDDQKNFGESLTIFYSMV 336
Query: 49 I 47
+
Sbjct: 337 L 337
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 16 LTFYLKTSNFISNMNKE*KNKQIHFCIMQWKRN 114
LT+ K + M + +N+ I FC +QW +
Sbjct: 1435 LTYVEKPVKILDTMERRTRNRVIRFCKVQWSNH 1467
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,564,468
Number of Sequences: 37544
Number of extensions: 319829
Number of successful extensions: 1042
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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