Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8g22
(511 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein. 44 2e-04
BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein. 44 2e-04
BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein. 44 2e-04
AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated tra... 44 2e-04
AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated tr... 44 2e-04
AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens ... 44 2e-04
AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 44 2e-04
AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated tr... 44 2e-04
AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated tr... 44 2e-04
D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein. 44 4e-04
CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein. 44 4e-04
BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated pr... 44 4e-04
BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated pr... 44 4e-04
BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated pr... 44 4e-04
AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein. 44 4e-04
AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein. 41 0.002
AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated pro... 40 0.004
AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated pro... 40 0.004
AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein. 40 0.004
U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein. 33 0.77
U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein. 33 0.77
U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein. 32 1.3
AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens ... 32 1.3
U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein. 31 1.8
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein. 31 1.8
U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein. 31 1.8
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 31 1.8
U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein. 31 1.8
AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein. 31 1.8
AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein. 31 1.8
AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein. 31 1.8
AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein. 31 1.8
M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposo... 31 2.3
M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein. 31 2.3
M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein. 31 2.3
BC041629-1|AAH41629.1| 264|Homo sapiens MAZ protein protein. 29 7.1
AF489858-1|AAN03800.1| 493|Homo sapiens serum amyloid A activat... 29 7.1
BC133703-1|AAI33704.1| 1504|Homo sapiens RAPGEF6 protein protein. 29 9.4
AF478567-1|AAM21637.1| 1601|Homo sapiens PDZ domain-containing g... 29 9.4
AF478468-1|AAL79915.1| 1601|Homo sapiens Rap1 guanine nucleotide... 29 9.4
AF394782-1|AAK83368.1| 1509|Homo sapiens rap guanine nucleotide ... 29 9.4
>BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein.
Length = 317
Score = 44.4 bits (100), Expect = 2e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHLFLHLVAL 449
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVL 131
>BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 44.4 bits (100), Expect = 2e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHLFLHLVAL 449
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVL 40
>BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 44.4 bits (100), Expect = 2e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHLFLHLVAL 449
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVL 40
>AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated
transmembrane protein 4 beta protein.
Length = 370
Score = 44.4 bits (100), Expect = 2e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHLFLHLVAL 449
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 159 CCLCCHVRTGTILLGVWYLIINAVVL 184
>AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta, variant 1 protein.
Length = 317
Score = 44.4 bits (100), Expect = 2e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHLFLHLVAL 449
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVL 131
>AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens
cDNA PSEC0001 fis, clone NT2RM1000066, moderately
similar to Lysosomal-associated transmembrane protein 4
beta. ).
Length = 226
Score = 44.4 bits (100), Expect = 2e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHLFLHLVAL 449
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVL 40
>AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane
transporter protein protein.
Length = 283
Score = 44.4 bits (100), Expect = 2e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHLFLHLVAL 449
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 72 CCLCCHVRTGTILLGVWYLIINAVVL 97
>AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta variant 2 protein.
Length = 317
Score = 44.4 bits (100), Expect = 2e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHLFLHLVAL 449
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVL 131
>AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated
transmembrane protein 4 beta protein.
Length = 226
Score = 44.4 bits (100), Expect = 2e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHLFLHLVAL 449
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVL 40
>D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein.
Length = 254
Score = 43.6 bits (98), Expect = 4e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 348 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 443
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 32 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 63
>CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein.
Length = 233
Score = 43.6 bits (98), Expect = 4e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 348 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 443
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 43.6 bits (98), Expect = 4e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 348 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 443
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 43.6 bits (98), Expect = 4e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 348 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 443
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 43.6 bits (98), Expect = 4e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 348 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 443
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein.
Length = 215
Score = 43.6 bits (98), Expect = 4e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 348 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 443
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein.
Length = 38
Score = 41.1 bits (92), Expect = 0.002
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 348 SERGSEWLCCFCLHVRTGTIILGSWHL 428
S+R CC C HVRTGTIILG+W++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYM 37
>AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHL 428
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHL 428
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.004
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 372 CCFCLHVRTGTIILGSWHL 428
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG ++ + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTDEFYQRYKEELVPFLLKLFQSIEK 501
>U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG ++ + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTDEFYQRYKEELVPFLLKLFQSIEK 501
>U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSTEK 501
>AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ39824 fis, clone SPLEN2011981. ).
Length = 372
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 24 PITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSTEK 73
>U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
>U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
>U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
>AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
>AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein.
Length = 420
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 101 PITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 150
>AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
>AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
>M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposon
L1.2. ).
Length = 1275
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEK 501
>M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEK 501
>M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein.
Length = 1192
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 2 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMK 151
P+T E+ +I L +K+PG DG + + +L+ L +F + K
Sbjct: 369 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEK 418
>BC041629-1|AAH41629.1| 264|Homo sapiens MAZ protein protein.
Length = 264
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 279 HILELTLEHFTTKAMLRFHP----KLGSERGSEWLCCFC-LHVRTGTIILGSWHLFLHL 440
H+ EL + FTT A LR H L + R LC C +H +T + G H+ HL
Sbjct: 190 HVCELCNKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAG--HMQTHL 246
>AF489858-1|AAN03800.1| 493|Homo sapiens serum amyloid A activating
factor 2 protein.
Length = 493
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 279 HILELTLEHFTTKAMLRFHP----KLGSERGSEWLCCFC-LHVRTGTIILGSWHLFLHL 440
H+ EL + FTT A LR H L + R LC C +H +T + G H+ HL
Sbjct: 419 HVCELCNKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAG--HMQTHL 475
>BC133703-1|AAI33704.1| 1504|Homo sapiens RAPGEF6 protein protein.
Length = 1504
Score = 29.1 bits (62), Expect = 9.4
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -1
Query: 448 SATRCRNRCHDPRIIVPVRT--CRQKQHSHSL-PRSLPNLGWNLNIALVVKCSRVSSRIC 278
SA RC + VP T + +H+ + S GW L ++KC VSS +
Sbjct: 1293 SAALQDERCSSQALAVPESTGALEKTEHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVS 1352
Query: 277 TDYISSE 257
+ IS E
Sbjct: 1353 NEEISQE 1359
>AF478567-1|AAM21637.1| 1601|Homo sapiens PDZ domain-containing
guanine nucleotide exchange factor PDZ-GEF2 protein.
Length = 1601
Score = 29.1 bits (62), Expect = 9.4
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -1
Query: 448 SATRCRNRCHDPRIIVPVRT--CRQKQHSHSL-PRSLPNLGWNLNIALVVKCSRVSSRIC 278
SA RC + VP T + +H+ + S GW L ++KC VSS +
Sbjct: 1285 SAALQDERCSSQALAVPESTGALEKTEHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVS 1344
Query: 277 TDYISSE 257
+ IS E
Sbjct: 1345 NEEISQE 1351
>AF478468-1|AAL79915.1| 1601|Homo sapiens Rap1 guanine
nucleotide-exchange factor PDZ-GEF2A protein.
Length = 1601
Score = 29.1 bits (62), Expect = 9.4
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -1
Query: 448 SATRCRNRCHDPRIIVPVRT--CRQKQHSHSL-PRSLPNLGWNLNIALVVKCSRVSSRIC 278
SA RC + VP T + +H+ + S GW L ++KC VSS +
Sbjct: 1285 SAALQDERCSSQALAVPESTGALEKTEHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVS 1344
Query: 277 TDYISSE 257
+ IS E
Sbjct: 1345 NEEISQE 1351
>AF394782-1|AAK83368.1| 1509|Homo sapiens rap guanine nucleotide
exchange factor protein.
Length = 1509
Score = 29.1 bits (62), Expect = 9.4
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -1
Query: 448 SATRCRNRCHDPRIIVPVRT--CRQKQHSHSL-PRSLPNLGWNLNIALVVKCSRVSSRIC 278
SA RC + VP T + +H+ + S GW L ++KC VSS +
Sbjct: 1298 SAALQDERCSSQALAVPESTGALEKTEHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVS 1357
Query: 277 TDYISSE 257
+ IS E
Sbjct: 1358 NEEISQE 1364
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,586,821
Number of Sequences: 237096
Number of extensions: 1702764
Number of successful extensions: 3258
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 3160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3258
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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