Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8g19
(522 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 40 0.001
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 40 0.001
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 32 0.29
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 32 0.29
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 32 0.29
AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine re... 31 0.50
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 30 0.87
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 30 0.87
AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical ... 30 0.87
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 29 2.0
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 29 2.0
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 29 2.0
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 29 2.0
Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical pr... 29 2.7
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 29 2.7
U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-bie... 29 2.7
AL021470-2|CAE17952.1| 398|Caenorhabditis elegans Hypothetical ... 29 2.7
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 28 3.5
Z68004-7|CAA91988.2| 237|Caenorhabditis elegans Hypothetical pr... 27 6.2
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical ... 27 6.2
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +3
Query: 288 QYPSYAEVMNEVERLKAGALRLLTREQVIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFL 467
Q P+ AE+ + + + A + + + M+ + + + D + E+ AF+VFD + GF+
Sbjct: 42 QNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 101
Query: 468 EIDELKTIVTSYAEPFSE 521
EL+ ++T+ E ++
Sbjct: 102 SAAELRHVMTNLGEKLTD 119
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +3
Query: 288 QYPSYAEVMNEVERLKAGALRLLTREQVIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFL 467
Q P+ AE+ + + + A + + + M+ + + + D + E+ AF+VFD + GF+
Sbjct: 42 QNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 101
Query: 468 EIDELKTIVTSYAEPFSE 521
EL+ ++T+ E ++
Sbjct: 102 SAAELRHVMTNLGEKLTD 119
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 35.5 bits (78), Expect = 0.023
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 294 PSYAEVMNEVERLKAGALRLLTREQVIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFLEI 473
P+ E++N V + + M+ + E D + + LAFKVFD + G++
Sbjct: 56 PTEEELLNMVNEYDVDGNGKIDFGEFCKMMKEMNKETD-QELIRLAFKVFDKDGNGYITA 114
Query: 474 DELKTIVTSYAEPFSE 521
E K +T+ E FSE
Sbjct: 115 QEFKHFMTTMGERFSE 130
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 31.9 bits (69), Expect = 0.29
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +3
Query: 288 QYPSYAEVMNEVERLKAGALRLLTREQVIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFL 467
Q P+ E+++ V + + + M+ + E D + AF+VFD + GF+
Sbjct: 66 QNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMKRMNKEND-SEMIREAFRVFDRDGNGFI 124
Query: 468 EIDELKTIVTSYAEPFSE 521
DE + +T + FS+
Sbjct: 125 TADEFRYFMTHMGDQFSD 142
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 31.9 bits (69), Expect = 0.29
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +3
Query: 288 QYPSYAEVMNEVERLKAGALRLLTREQVIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFL 467
Q P+ E+++ V + + + M+ + E D + AF+VFD + GF+
Sbjct: 66 QNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMKRMNKEND-SEMIREAFRVFDRDGNGFI 124
Query: 468 EIDELKTIVTSYAEPFSE 521
DE + +T + FS+
Sbjct: 125 TADEFRYFMTHMGDQFSD 142
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 405 DIKHELCLAFKVFDTEKRGFLEIDELKTIVTSYAEPFSE 521
D + E+ AF+VFD + GF+ EL+ ++T+ E ++
Sbjct: 30 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 68
>AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine
receptor, class x protein67 protein.
Length = 297
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -2
Query: 329 SLYFIHYLCITWILEIPSMKLFKV*ERHEFVYCYRSDRIT-ISTG*LRFCIILKPL 165
S F+ Y C +L+ P MK + ++CY S +T RFC +L PL
Sbjct: 54 STIFLLYFCPMVLLDQPLMKKYSFIMGCALLFCYESSVLTHFCISINRFCAVLVPL 109
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 414 HELCLAFKVFDTEKRGFLEIDELKTIVTSYAEPFS 518
HE LAF FD EK G+L+ + + + S FS
Sbjct: 232 HEFKLAFDYFDQEKNGWLDYEHFELCLKSQGYNFS 266
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 363 EQVIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFLEIDELKTIVTSYAEPFSE 521
++ + +L + + +P + EL F VFD G + ID+L ++ E +E
Sbjct: 63 DEFLNVLRRQICDPKEERELRDVFNVFDKNGDGVISIDDLIFVMCQLGEKLTE 115
>AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical
protein F56H1.3 protein.
Length = 1174
Score = 30.3 bits (65), Expect = 0.87
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 288 QYPSYAEVMNEVERLKAGALRLLTREQVIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFL 467
+Y + ++ + +R + L+L T EQ + +L V + I EL + K+ +TEK
Sbjct: 414 EYFHFEKLEEKNKRFQKTTLKLETIEQYVELLGSSVKKNQIFDELEASIKICETEKPDVY 473
Query: 468 EIDELK 485
+ ELK
Sbjct: 474 FMKELK 479
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 306 EVMNEVERLKAGALRLLTREQVIYMLNKWVLEPDIKHELCLAFK 437
++ N + + A L +TR+ I LN+ V +PD ELCL K
Sbjct: 556 DIYNMLALINAPHLSTITRQSSIDELNEHVGKPDDSVELCLPAK 599
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 369 VIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFLEIDELKTIVTSYAEPFSE 521
++Y + V + ++ EL AF++FD E G++ LK ++ A+ ++
Sbjct: 79 LVYTVANTVDKETLEKELREAFRLFDKEGNGYISRPTLKALLKEIADDLTD 129
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 369 VIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFLEIDELKTIVTSYAEPFSE 521
++Y + V + ++ EL AF++FD E G++ LK ++ A+ ++
Sbjct: 79 LVYTVANTVDKETLEKELREAFRLFDKEGNGYISRPTLKALLKEIADDLTD 129
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 369 VIYMLNKWVLEPDIKHELCLAFKVFDTEKRGFLEIDELKTIVTSYAEPFSE 521
++Y + V + ++ EL AF++FD E G++ LK ++ A+ ++
Sbjct: 79 LVYTVANTVDKETLEKELREAFRLFDKEGNGYISRPTLKALLKEIADDLTD 129
>Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical
protein R08D7.5 protein.
Length = 148
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 399 EPDIKHELCLAFKVFDTEKRGFLEIDELKTIVTSYAEPFSE 521
E + E+ AFK+FD E +G + + LK + E ++
Sbjct: 75 EDKVTTEMRSAFKLFDPESKGTITVANLKMVAKELGETLAD 115
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
protein F48C1.1 protein.
Length = 1064
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +3
Query: 93 VLDAYNPLQNVSLRFNE--DQLKEIGEWFENN--AKPQLTSTDGDPIRAITVDKFVSFLN 260
V D N V +RF D ++ +W+ NN ++P S D P D + +
Sbjct: 412 VFDEINKGSRVEIRFGTFTDYFNDLEKWYSNNKDSEPPTVSGDFFPYMCALGDYWTGYYT 471
Query: 261 LKKFHRR 281
+ F +R
Sbjct: 472 TRPFFKR 478
>U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 2 protein.
Length = 699
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 411 KHELCLAFKVFDTEKRGFLEIDELKT---IVTSYAEPFSE 521
KHE L FK+ +EK + D+++T IV SYA F E
Sbjct: 532 KHEKSLMFKISHSEKTCKIYHDKIETMGAIVQSYANVFKE 571
>AL021470-2|CAE17952.1| 398|Caenorhabditis elegans Hypothetical
protein Y17D7A.3b protein.
Length = 398
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +3
Query: 237 DKFVSFL--NLKKFHRRNFQYPSYA----EVMNEVERLKAGALRLLTREQVIYMLNKWVL 398
+K + FL +L ++ + + P+YA ++M R+K L+ R+Q+ + N W +
Sbjct: 328 EKMLGFLADDLHSYYVKQLRMPNYAARLAKLMKINNRIKESVLKTRQRQQIAELFNVWTV 387
Query: 399 E 401
+
Sbjct: 388 D 388
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 99 DAYNPLQNVSLRFNEDQLKEIGEWFENNAKPQLT 200
D YNP VS F E + K +W E KP+LT
Sbjct: 242 DEYNPFNKVSDEFVEKREK---QWQEKTQKPRLT 272
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 99 DAYNPLQNVSLRFNEDQLKEIGEWFENNAKPQLT 200
D YNP VS F E + K +W E KP+LT
Sbjct: 242 DEYNPFNKVSDEFVEKREK---QWQEKTQKPRLT 272
>Z68004-7|CAA91988.2| 237|Caenorhabditis elegans Hypothetical
protein F47B10.8 protein.
Length = 237
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 1 DILQLSIDSCGVFLVNSDLKLIVIIFSTQWQFSMLIILFKMYPYDSMK 144
D + L CGV S L + ++ W F M IILF ++ Y +K
Sbjct: 108 DCISLLTLFCGVSKQRSGLLKPYLFYNVIWNFGM-IILFLVFVYHMLK 154
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 414 HELCLAFKVFDTEKRGFLEIDELKTIVTSYAEPFS 518
HE LAF FD E+ G+L+ + + S FS
Sbjct: 1978 HEFELAFDYFDRERNGWLDYKHFELCLKSQGYNFS 2012
>AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical
protein R02D3.4 protein.
Length = 782
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 153 KEIGEWFENNAKPQLTSTDGDPIRAITVDKFVSFLNLKKFHRRNFQY 293
+E+GE E ++P +TD PI +T+ + L ++ +RN+ Y
Sbjct: 95 EELGELIETVSRPSEANTDITPIGGLTM--AIEALAVQSPEQRNYNY 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,256,713
Number of Sequences: 27780
Number of extensions: 189348
Number of successful extensions: 597
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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