Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8g12
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   2.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.6  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 327 DYRQIIIFSLLFVVLVF 277
           DY+Q ++F L++ +L F
Sbjct: 157 DYKQPVVFDLVYFILAF 173


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 312 IIFSLLFVVLVFDPEMKRQF 253
           ++FS + + L ++P  KRQF
Sbjct: 146 LVFSEVLLFLDYNPSQKRQF 165


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +1

Query: 415 KPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGLK 525
           K   + P P +K +     K   +  + G  P+QG++
Sbjct: 3   KSTKIFPVPGDKNLHKSYSKMLILAQIFGFFPVQGVR 39


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +1

Query: 415 KPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGLK 525
           K   + P P +K +     K   +  + G  P+QG++
Sbjct: 3   KSTKIFPVPGDKNLHKSYSKMLILAQIFGFFPVQGVR 39



 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 81  RMSRKLTRFMI*WKFALLV 137
           RM   L R    W FALL+
Sbjct: 310 RMRNDLERLYFYWSFALLI 328


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 579 FIPGFLGLPSQRN 617
           F+PG LGL S+ N
Sbjct: 206 FVPGVLGLLSRSN 218


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 579 FIPGFLGLPSQRN 617
           F+PG LGL S+ N
Sbjct: 206 FVPGVLGLLSRSN 218


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 579 FIPGFLGLPSQRN 617
           F+PG LGL S+ N
Sbjct: 206 FVPGVLGLLSRSN 218


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 579 FIPGFLGLPSQRN 617
           F+PG LGL S+ N
Sbjct: 206 FVPGVLGLLSRSN 218


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 173 ITIMIRKKLLTIDFLQSCNLL 235
           ITI IRK  L  +F + C  L
Sbjct: 38  ITINIRKNGLNYNFTKKCYFL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,019
Number of Sequences: 336
Number of extensions: 3162
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)