Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8g12
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p pro...    36   0.034
AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,...    36   0.034
AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,...    36   0.034
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA...    29   6.9  
BT003778-1|AAO41459.1|  278|Drosophila melanogaster RE04224p pro...    28   9.1  
AE013599-2441|AAF57885.2|  278|Drosophila melanogaster CG10953-P...    28   9.1  

>BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p
           protein.
          Length = 260

 Score = 36.3 bits (80), Expect = 0.034
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 517 GLKVKAGTRVPAQV-RFAHTDISYPDFSAYRRKETQD 624
           GLK  +G  V +   R AHTD+  PDFSAYRR+  +D
Sbjct: 20  GLKA-SGVAVNSMANRQAHTDLQVPDFSAYRRESVKD 55


>AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,
           isoform B protein.
          Length = 230

 Score = 36.3 bits (80), Expect = 0.034
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 517 GLKVKAGTRVPAQV-RFAHTDISYPDFSAYRRKETQD 624
           GLK  +G  V +   R AHTD+  PDFSAYRR+  +D
Sbjct: 20  GLKA-SGVAVNSMANRQAHTDLQVPDFSAYRRESVKD 55


>AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,
           isoform A protein.
          Length = 260

 Score = 36.3 bits (80), Expect = 0.034
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 517 GLKVKAGTRVPAQV-RFAHTDISYPDFSAYRRKETQD 624
           GLK  +G  V +   R AHTD+  PDFSAYRR+  +D
Sbjct: 20  GLKA-SGVAVNSMANRQAHTDLQVPDFSAYRRESVKD 55


>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
            protein.
          Length = 4010

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 189  EKNF*QLIFCNLAIFFSDIDNKIDVSFLDRTPALRKVVKK*LFAY-NLSKQ 338
            E +F QLI+C+     +D  N ++V  L+    LR+VV+  L  Y N+SK+
Sbjct: 2229 ESDFRQLIYCDFTNPKADTKNYVEVQDLEE---LRRVVEAYLVEYNNMSKK 2276


>BT003778-1|AAO41459.1|  278|Drosophila melanogaster RE04224p
           protein.
          Length = 278

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +1

Query: 370 APYFKSSTQVVANSLKPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVP 549
           AP ++ +   V       VV+P P+   VV+P P  + V  +    P++     A   +P
Sbjct: 39  APVYQPAPAPVYQPAPAPVVIPAPAPAPVVIPAPAPAPV-VIPAPAPVKTYVPPAPISIP 97

Query: 550 AQV 558
           A V
Sbjct: 98  APV 100


>AE013599-2441|AAF57885.2|  278|Drosophila melanogaster CG10953-PA
           protein.
          Length = 278

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +1

Query: 370 APYFKSSTQVVANSLKPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVP 549
           AP ++ +   V       VV+P P+   VV+P P  + V  +    P++     A   +P
Sbjct: 39  APVYQPAPAPVYQPAPAPVVIPAPAPAPVVIPAPAPAPV-VIPAPAPVKTYVPPAPISIP 97

Query: 550 AQV 558
           A V
Sbjct: 98  APV 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,942,487
Number of Sequences: 53049
Number of extensions: 562858
Number of successful extensions: 1325
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)